Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPTA1P02549 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 RN7SKP161-201ENST00000411110 305 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.65□□□□□ -1.5
SPTA1P02549 MED28P4-201ENST00000433137 572 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.65□□□□□ -1.5
SPTA1P02549 AL512593.1-201ENST00000444758 779 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.65□□□□□ -1.5
SPTA1P02549 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
SPTA1P02549 AC010463.3-201ENST00000594077 500 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 CU639417.4-201ENST00000623928 207 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SPTA1P02549 AC027088.4-201ENST00000611559 1947 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 AL022311.1-201ENST00000623726 19416 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
SPTA1P02549 NEK2P2-201ENST00000438441 1338 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 AC011008.2-201ENST00000624866 3352 ntBASIC5.65□□□□□ -1.5
SPTA1P02549 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SPTA1P02549 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SPTA1P02549 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.65□□□□□ -1.51
SPTA1P02549 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC5.65□□□□□ -1.51
SPTA1P02549 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SPTA1P02549 AL049697.3-201ENST00000406493 982 ntBASIC5.65□□□□□ -1.51
SPTA1P02549 AC016397.1-201ENST00000412463 242 ntBASIC5.65□□□□□ -1.51
SPTA1P02549 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SPTA1P02549 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.65□□□□□ -1.51
SPTA1P02549 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.65□□□□□ -1.51
SPTA1P02549 AL355032.1-201ENST00000472981 438 ntBASIC5.65□□□□□ -1.51
SPTA1P02549 AC022415.1-202ENST00000486612 523 ntBASIC5.65□□□□□ -1.51
SPTA1P02549 AC083795.1-201ENST00000491760 320 ntBASIC5.65□□□□□ -1.51
SPTA1P02549 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.65□□□□□ -1.51
SPTA1P02549 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.65□□□□□ -1.51
SPTA1P02549 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.65□□□□□ -1.51
SPTA1P02549 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SPTA1P02549 AC012254.3-201ENST00000591183 2117 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.64□□□□□ -1.51
SPTA1P02549 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SPTA1P02549 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SPTA1P02549 MFSD8-217ENST00000641178 4374 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 RPL35AP31-201ENST00000418340 337 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 NPM1P51-201ENST00000443470 744 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AC007386.1-201ENST00000455212 582 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.64□□□□□ -1.51
SPTA1P02549 AC006530.1-201ENST00000555980 571 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SPTA1P02549 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SPTA1P02549 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.64□□□□□ -1.51
SPTA1P02549 AL022394.1-201ENST00000606979 292 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.64□□□□□ -1.51
SPTA1P02549 uc_338.18-201ENST00000615451 175 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AC010435.1-201ENST00000623353 1177 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.64□□□□□ -1.51
SPTA1P02549 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.64□□□□□ -1.51
SPTA1P02549 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.64□□□□□ -1.51
SPTA1P02549 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 PARP4P2-201ENST00000446672 3326 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.64□□□□□ -1.51
SPTA1P02549 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SPTA1P02549 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SPTA1P02549 SNORA11C-201ENST00000408532 129 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AC092375.1-201ENST00000550410 637 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.64□□□□□ -1.51
SPTA1P02549 AL591767.3-201ENST00000554632 525 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AL049840.6-201ENST00000604583 345 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 MIR7159-201ENST00000620587 66 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SPTA1P02549 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SPTA1P02549 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.64□□□□□ -1.51
SPTA1P02549 AC018765.1-201ENST00000623357 3446 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SPTA1P02549 RNA5SP350-201ENST00000363298 111 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 PSMC1P2-201ENST00000423961 1204 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 AL139148.1-201ENST00000427122 680 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 RPL23AP64-201ENST00000469465 435 ntBASIC5.63□□□□□ -1.51
SPTA1P02549 CD86-209ENST00000493101 1572 ntTSL 2 BASIC5.63□□□□□ -1.51
SPTA1P02549 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SPTA1P02549 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.63□□□□□ -1.51
SPTA1P02549 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.63□□□□□ -1.51
SPTA1P02549 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.63□□□□□ -1.51
SPTA1P02549 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms