Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1BO75841 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1BO75841 AC127381.1-201ENST00000555979 939 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1BO75841 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.15□□□□□ -1.59
UPK1BO75841 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.15□□□□□ -1.59
UPK1BO75841 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC5.15□□□□□ -1.59
UPK1BO75841 AC012640.3-201ENST00000607847 430 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 FAM74A6-203ENST00000615956 481 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 MIR7854-201ENST00000620068 65 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 LINC02495-203ENST00000636704 242 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1BO75841 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1BO75841 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 AC144833.1-201ENST00000567953 4089 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 AC083899.1-201ENST00000454465 3819 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1BO75841 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1BO75841 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1BO75841 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1BO75841 HSPE1P16-201ENST00000426640 348 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 ETF1P1-206ENST00000427296 984 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1BO75841 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1BO75841 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.14□□□□□ -1.59
UPK1BO75841 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1BO75841 CCNJP1-201ENST00000450600 1149 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 OR52E3P-201ENST00000452083 936 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 SDC4P-201ENST00000453285 601 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1BO75841 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
UPK1BO75841 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1BO75841 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.14□□□□□ -1.59
UPK1BO75841 RPL37-205ENST00000509877 637 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 ASNSP4-201ENST00000511103 447 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 OR5D2P-201ENST00000524390 911 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 AC069240.2-201ENST00000550242 609 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.14□□□□□ -1.59
UPK1BO75841 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 AC127024.5-201ENST00000580085 462 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 MIR7853-201ENST00000584820 132 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.14□□□□□ -1.59
UPK1BO75841 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
UPK1BO75841 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 RBPJP6-201ENST00000411556 1431 ntBASIC5.14□□□□□ -1.59
UPK1BO75841 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPK1BO75841 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
UPK1BO75841 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 AC119674.1-202ENST00000641333 1860 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.13□□□□□ -1.59
UPK1BO75841 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 AC006206.1-201ENST00000544842 3387 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPK1BO75841 PPIAP24-201ENST00000328558 471 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UPK1BO75841 RNU12-2P-201ENST00000364789 156 ntBASIC5.13□□□□□ -1.59
UPK1BO75841 U3.28-201ENST00000391249 210 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms