Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC093671.1-201ENST00000624981 2929 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 RNA5SP429-201ENST00000363688 109 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 RN7SKP186-201ENST00000365371 303 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC087752.1-201ENST00000391360 558 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 AL672212.1-201ENST00000422246 400 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 PTPN2P1-201ENST00000423212 1072 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 E2F6P1-201ENST00000428850 745 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 E2F6P3-201ENST00000441743 743 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.85□□□□□ -1.63
SSSCA1O60232 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AL079303.1-201ENST00000486611 463 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 PDCL3P4-201ENST00000489621 720 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 GLUD1P3-202ENST00000508551 200 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 OR4D12P-201ENST00000509361 911 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC096661.1-201ENST00000515870 822 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC078899.1-201ENST00000521432 1185 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AL513327.3-201ENST00000602618 469 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 AL353729.2-201ENST00000605859 1249 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 SNORA74.4-201ENST00000607595 199 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AC096708.4-201ENST00000620563 552 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.85□□□□□ -1.63
SSSCA1O60232 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.85□□□□□ -1.63
SSSCA1O60232 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSSCA1O60232 AL133243.2-201ENST00000610331 1621 ntBASIC4.85□□□□□ -1.63
SSSCA1O60232 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.85□□□□□ -1.63
SSSCA1O60232 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SSSCA1O60232 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.85□□□□□ -1.63
SSSCA1O60232 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
SSSCA1O60232 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSSCA1O60232 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
SSSCA1O60232 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSSCA1O60232 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSSCA1O60232 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSSCA1O60232 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSSCA1O60232 RNA5SP346-201ENST00000363541 121 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSSCA1O60232 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSSCA1O60232 GRPEL2P2-201ENST00000421856 670 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AC112492.2-201ENST00000432774 1030 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AC242426.1-201ENST00000435270 960 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 SOCS5P1-201ENST00000440415 949 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 MED28P3-201ENST00000444288 531 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AL512593.1-201ENST00000444758 779 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSSCA1O60232 PCMTD1P3-201ENST00000451824 472 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC093816.1-201ENST00000515076 913 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC126615.2-201ENST00000553003 515 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.84□□□□□ -1.63
SSSCA1O60232 RN7SL131P-201ENST00000579043 256 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 AC006115.2-201ENST00000596823 202 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 MIR6762-201ENST00000613340 86 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AL121985.3-201ENST00000620690 523 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AC022400.9-201ENST00000623633 273 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 AC005618.4-201ENST00000625053 554 ntBASIC4.84□□□□□ -1.63
SSSCA1O60232 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.84□□□□□ -1.63
SSSCA1O60232 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSSCA1O60232 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSSCA1O60232 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SSSCA1O60232 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms