Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Upk1aQ9D132 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.13■□□□□ 0.17
Upk1aQ9D132 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Gm6576-201ENSMUST00000169678 883 ntBASIC16.13■□□□□ 0.17
Upk1aQ9D132 Mir6349-201ENSMUST00000184059 97 ntBASIC16.13■□□□□ 0.17
Upk1aQ9D132 Gm37179-201ENSMUST00000194862 823 ntBASIC16.13■□□□□ 0.17
Upk1aQ9D132 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.13■□□□□ 0.17
Upk1aQ9D132 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Upk1aQ9D132 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.12■□□□□ 0.17
Upk1aQ9D132 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.12■□□□□ 0.17
Upk1aQ9D132 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Upk1aQ9D132 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.11■□□□□ 0.17
Upk1aQ9D132 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.11■□□□□ 0.17
Upk1aQ9D132 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.11■□□□□ 0.17
Upk1aQ9D132 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Upk1aQ9D132 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms