Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Scn3bQ8BHK2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.85■□□□□ 0.13
Scn3bQ8BHK2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn3bQ8BHK2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Scn3bQ8BHK2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.83■□□□□ 0.13
Scn3bQ8BHK2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.83■□□□□ 0.13
Scn3bQ8BHK2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scn3bQ8BHK2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn3bQ8BHK2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Gm42778-201ENSMUST00000199644 553 ntBASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn3bQ8BHK2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms