Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SgcaP82350 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SgcaP82350 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SgcaP82350 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
SgcaP82350 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.3□□□□□ -0.12
SgcaP82350 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SgcaP82350 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SgcaP82350 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SgcaP82350 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SgcaP82350 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SgcaP82350 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.29□□□□□ -0.12
SgcaP82350 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SgcaP82350 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SgcaP82350 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SgcaP82350 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.28□□□□□ -0.12
SgcaP82350 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.28□□□□□ -0.12
SgcaP82350 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.28□□□□□ -0.12
SgcaP82350 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SgcaP82350 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.28□□□□□ -0.12
SgcaP82350 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SgcaP82350 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SgcaP82350 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.27□□□□□ -0.12
SgcaP82350 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SgcaP82350 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
SgcaP82350 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.27□□□□□ -0.12
SgcaP82350 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SgcaP82350 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.27□□□□□ -0.13
SgcaP82350 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SgcaP82350 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms