Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3EP60228 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3EP60228 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
EIF3EP60228 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
EIF3EP60228 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
EIF3EP60228 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3EP60228 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3EP60228 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
EIF3EP60228 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3EP60228 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
EIF3EP60228 CROCCP5-201ENST00000436658 830 ntBASIC20.38■□□□□ 0.85
EIF3EP60228 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3EP60228 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3EP60228 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.38■□□□□ 0.85
EIF3EP60228 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3EP60228 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3EP60228 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
EIF3EP60228 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.38■□□□□ 0.85
EIF3EP60228 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.37■□□□□ 0.85
EIF3EP60228 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3EP60228 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3EP60228 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3EP60228 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.37■□□□□ 0.85
EIF3EP60228 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.37■□□□□ 0.85
EIF3EP60228 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.37■□□□□ 0.85
EIF3EP60228 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
EIF3EP60228 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
EIF3EP60228 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3EP60228 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3EP60228 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3EP60228 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.36■□□□□ 0.85
EIF3EP60228 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3EP60228 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
EIF3EP60228 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3EP60228 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.36■□□□□ 0.85
EIF3EP60228 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.36■□□□□ 0.85
EIF3EP60228 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
EIF3EP60228 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
EIF3EP60228 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
EIF3EP60228 AC005332.7-201ENST00000614046 2005 ntBASIC20.36■□□□□ 0.85
EIF3EP60228 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
EIF3EP60228 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
EIF3EP60228 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
EIF3EP60228 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
EIF3EP60228 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.35■□□□□ 0.85
EIF3EP60228 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.35■□□□□ 0.85
EIF3EP60228 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.35■□□□□ 0.85
EIF3EP60228 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
EIF3EP60228 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
EIF3EP60228 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3EP60228 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3EP60228 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3EP60228 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.34■□□□□ 0.85
EIF3EP60228 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3EP60228 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
EIF3EP60228 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.34■□□□□ 0.85
EIF3EP60228 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.34■□□□□ 0.85
EIF3EP60228 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
EIF3EP60228 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
EIF3EP60228 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
EIF3EP60228 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.33■□□□□ 0.85
EIF3EP60228 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.33■□□□□ 0.85
EIF3EP60228 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
EIF3EP60228 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.33■□□□□ 0.85
EIF3EP60228 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.33■□□□□ 0.85
EIF3EP60228 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
EIF3EP60228 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EIF3EP60228 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
EIF3EP60228 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
EIF3EP60228 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
EIF3EP60228 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EIF3EP60228 AC087289.5-201ENST00000586076 3175 ntBASIC20.33■□□□□ 0.84
EIF3EP60228 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms