Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.47■□□□□ 0.55
PDGFAP04085 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDGFAP04085 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFAP04085 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDGFAP04085 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.46■□□□□ 0.55
PDGFAP04085 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDGFAP04085 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
PDGFAP04085 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.46■□□□□ 0.55
PDGFAP04085 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.46■□□□□ 0.55
PDGFAP04085 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 AC145285.6-201ENST00000604632 637 ntBASIC18.46■□□□□ 0.55
PDGFAP04085 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PDGFAP04085 AL020996.1-203ENST00000536896 2307 ntBASIC18.46■□□□□ 0.55
PDGFAP04085 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFAP04085 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFAP04085 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PDGFAP04085 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PDGFAP04085 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFAP04085 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.45■□□□□ 0.54
PDGFAP04085 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDGFAP04085 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.45■□□□□ 0.54
PDGFAP04085 AL353807.1-201ENST00000427475 662 ntBASIC18.45■□□□□ 0.54
PDGFAP04085 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFAP04085 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFAP04085 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFAP04085 AC073195.1-201ENST00000607241 877 ntBASIC18.45■□□□□ 0.54
PDGFAP04085 AP000525.1-201ENST00000608286 694 ntBASIC18.45■□□□□ 0.54
PDGFAP04085 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFAP04085 AC092865.7-201ENST00000641832 219 ntBASIC18.45■□□□□ 0.54
PDGFAP04085 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFAP04085 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDGFAP04085 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PDGFAP04085 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFAP04085 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDGFAP04085 AL157384.1-201ENST00000445995 2473 ntBASIC18.44■□□□□ 0.54
PDGFAP04085 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFAP04085 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFAP04085 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFAP04085 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFAP04085 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDGFAP04085 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFAP04085 AC023632.3-201ENST00000521633 145 ntBASIC18.44■□□□□ 0.54
PDGFAP04085 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFAP04085 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.44■□□□□ 0.54
PDGFAP04085 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDGFAP04085 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFAP04085 AL049597.2-201ENST00000565575 961 ntBASIC18.44■□□□□ 0.54
PDGFAP04085 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.44■□□□□ 0.54
PDGFAP04085 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFAP04085 REXO1L10P-201ENST00000615707 1290 ntBASIC18.44■□□□□ 0.54
PDGFAP04085 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.44■□□□□ 0.54
PDGFAP04085 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDGFAP04085 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFAP04085 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFAP04085 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDGFAP04085 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDGFAP04085 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFAP04085 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFAP04085 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFAP04085 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDGFAP04085 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 AC005521.1-201ENST00000393351 872 ntBASIC18.43■□□□□ 0.54
PDGFAP04085 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.43■□□□□ 0.54
PDGFAP04085 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.43■□□□□ 0.54
PDGFAP04085 NUDT16P1-203ENST00000513809 620 ntBASIC18.43■□□□□ 0.54
PDGFAP04085 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFAP04085 AC005363.2-201ENST00000618631 242 ntBASIC18.43■□□□□ 0.54
PDGFAP04085 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFAP04085 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PDGFAP04085 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PDGFAP04085 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms