Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MIR935-201ENST00000401179 91 ntBASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 LSM12P1-201ENST00000411836 588 ntBASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 AC093787.1-201ENST00000450396 207 ntBASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 C2orf69P4-201ENST00000565394 541 ntBASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 AC092437.1-201ENST00000624794 1048 ntBASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 AL691432.2-201ENST00000607222 2038 ntBASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 AFG3L1P-217ENST00000557444 2447 ntBASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV4A0A0B4J268 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 AC026185.1-201ENST00000445748 174 ntBASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 AF201337.1-201ENST00000520239 748 ntBASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 AC023632.3-201ENST00000521633 145 ntBASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 IKBKGP1-201ENST00000612193 1073 ntBASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV4A0A0B4J268 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV4A0A0B4J268 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV4A0A0B4J268 KRT17P1-201ENST00000399211 1546 ntBASIC14.21□□□□□ -0.13
TRAV4A0A0B4J268 MKRN4P-201ENST00000444706 1521 ntBASIC14.21□□□□□ -0.13
TRAV4A0A0B4J268 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms