Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AL353898.1-201ENST00000444055 238 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AL139156.3-201ENST00000454802 394 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 RBMY2HP-201ENST00000457961 720 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 SUMO1P1-201ENST00000497904 306 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AL512310.9-201ENST00000553311 948 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC092718.4-201ENST00000566639 716 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC021483.2-201ENST00000567415 758 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC027216.1-201ENST00000577726 685 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AL513218.1-201ENST00000606527 391 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 MIR7854-201ENST00000620068 65 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AP000943.4-201ENST00000622912 357 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC013488.1-201ENST00000526618 1838 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC025809.2-201ENST00000625085 1802 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL359715.3-201ENST00000569267 2123 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SNORA63.3-201ENST00000362682 132 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 RNA5SP512-201ENST00000364550 120 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SNORA64.3-201ENST00000365647 134 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 RNU6-1176P-201ENST00000390955 107 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL034403.1-201ENST00000399414 885 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 ARL2BPP3-201ENST00000421226 480 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 UBE2D3P3-201ENST00000426992 425 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 COL11A2P1-205ENST00000441798 676 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC245291.3-201ENST00000443400 292 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC108751.3-201ENST00000461814 1020 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 RPS7P10-201ENST00000464254 603 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC068522.1-201ENST00000482895 345 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC092902.1-201ENST00000486999 259 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC083906.1-201ENST00000509298 406 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 IGHV3-57-201ENST00000520143 280 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC004923.2-201ENST00000529649 369 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AP003115.1-201ENST00000569849 463 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AP002884.5-201ENST00000595053 1132 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC245052.7-201ENST00000601161 359 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL049840.5-201ENST00000602827 552 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL953862.2-201ENST00000603089 820 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 CYCSP1-201ENST00000604815 315 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SNORD96A-201ENST00000606577 79 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC024933.1-201ENST00000608472 348 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC005277.2-201ENST00000617898 390 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 OR8A1-204ENST00000642111 1145 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL139384.2-201ENST00000613809 3590 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SPATA2P1-201ENST00000431223 2055 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 AL589993.1-201ENST00000407450 2524 ntBASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 MAPK10-357ENST00000641831 2858 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms