Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 MIR323B-201ENST00000385269 82 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC003045.1-201ENST00000398779 713 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 RN7SKP240-201ENST00000410583 375 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 MTND2P15-201ENST00000418575 892 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 PSMC1P2-201ENST00000423961 1204 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 GM2AP2-201ENST00000491764 562 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AP001960.1-201ENST00000506494 658 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 RNA5SP418-201ENST00000515951 117 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 OR4A46P-201ENST00000527255 933 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC005726.4-201ENST00000582858 458 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AL078623.1-201ENST00000602702 907 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 BNIP3P35-201ENST00000604530 490 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 LINC02495-203ENST00000636704 242 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC062029.1-202ENST00000606164 3651 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AC104966.1-201ENST00000467010 1464 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 AL355377.1-201ENST00000621125 1653 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SSX2IPQ9Y2D8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 RPL31P11-201ENST00000426558 1558 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 CASC19-246ENST00000641625 1606 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 Y_RNA.110-201ENST00000363220 99 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC092642.1-201ENST00000392417 425 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC096537.2-201ENST00000413707 714 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC002127.1-201ENST00000421305 225 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 OR52I1-201ENST00000450052 1050 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 Z83838.1-202ENST00000456225 839 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AP002453.1-201ENST00000492327 668 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AL133399.1-201ENST00000527476 298 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 FXNP1-201ENST00000555153 337 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 DYNLL1P1-201ENST00000595442 269 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 GMCL1P2-201ENST00000605230 823 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AL359742.1-201ENST00000622497 540 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC120057.5-201ENST00000623840 154 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 AC119674.1-204ENST00000641348 1343 ntBASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SSX2IPQ9Y2D8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms