Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 RARSP1-201ENST00000542842 1418 ntBASIC10.13□□□□□ -0.79
RTN4Q9NQC3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 C1D-202ENST00000407324 1379 ntTSL 3 BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 SGK1-211ENST00000475719 1383 ntTSL 2 BASIC10.13□□□□□ -0.79
RTN4Q9NQC3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC018880.1-201ENST00000418898 1319 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 Y_RNA.402-201ENST00000383972 102 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 MIR711-201ENST00000390201 76 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 DNAJA1P3-201ENST00000399417 1194 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 RNU2-8P-201ENST00000410727 190 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 USP9YP6-201ENST00000413550 854 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC009480.2-201ENST00000422916 432 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 OR2S1P-201ENST00000447226 950 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 USP9YP34-201ENST00000453983 808 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 PABPC1P3-201ENST00000469174 459 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 RPL15P21-201ENST00000495592 567 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 C5orf66-203ENST00000513931 474 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC022034.4-201ENST00000521930 469 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC018410.1-202ENST00000545474 492 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC004858.1-201ENST00000554078 242 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AL390334.1-201ENST00000556395 450 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 ACTR3BP1-201ENST00000605584 1247 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC104010.1-201ENST00000616889 150 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC092794.2-201ENST00000620933 563 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 LINC00426-207ENST00000447147 1589 ntTSL 3 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC092821.2-201ENST00000545710 2042 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AC105233.5-202ENST00000642083 4132 ntBASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
RTN4Q9NQC3 AP000866.6-201ENST00000638898 3579 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AC117529.2-201ENST00000512159 2068 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 SPATA31B1P-201ENST00000434692 4016 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 SPATA31C1-201ENST00000420021 3895 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AC108704.2-201ENST00000623017 1565 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AL022322.1-201ENST00000609162 1433 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 PABPC1L-203ENST00000217075 670 ntTSL 5 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 CSH1-202ENST00000329882 1073 ntTSL 2 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 RNY4P14-201ENST00000363656 96 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 RNU6-441P-201ENST00000384545 106 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 MIR92A2-201ENST00000385299 75 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 FTH1P3-201ENST00000394290 584 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 HIST1H1PS1-201ENST00000404269 574 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 ANXA2P3-201ENST00000404883 1008 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AL451061.1-201ENST00000407887 862 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 TCEAL4-202ENST00000415568 959 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 SPA17P1-201ENST00000416656 452 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AL157884.1-201ENST00000424561 454 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AC127526.2-201ENST00000426436 775 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AL929410.1-201ENST00000428250 154 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
RTN4Q9NQC3 FDPSP8-201ENST00000438304 1089 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 OR7E125P-201ENST00000443450 846 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 MTND5P20-201ENST00000448677 143 ntBASIC10.11□□□□□ -0.79
RTN4Q9NQC3 AC073336.1-201ENST00000448767 664 ntTSL 3 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms