Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC016583.1-201ENST00000624221 2431 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC011416.1-201ENST00000514947 1732 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AL359955.1-201ENST00000455242 3275 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC004076.2-201ENST00000620532 3323 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 OR7A2P-201ENST00000304105 930 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 E2F6P1-201ENST00000428850 745 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 FECHP1-201ENST00000431896 1214 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 E2F6P3-201ENST00000441743 743 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AL353803.3-201ENST00000444641 335 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 RPS3AP49-201ENST00000472161 790 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 PPIAP14-201ENST00000577627 496 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AC012175.1-201ENST00000603755 531 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 RPS2P45-201ENST00000469997 2057 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC28BQ9BUN5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC28BQ9BUN5 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.96□□□□□ -1.45
CCDC28BQ9BUN5 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CCDC28BQ9BUN5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.96□□□□□ -1.45
CCDC28BQ9BUN5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 GRPEL2P2-201ENST00000421856 670 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AL663074.2-201ENST00000440621 479 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 GAPDHP23-201ENST00000444823 993 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 PCMTD1P3-201ENST00000451824 472 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 RN7SKP198-201ENST00000459286 306 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC124945.1-201ENST00000485133 188 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 RNA5SP230-201ENST00000517039 122 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC016839.1-201ENST00000578162 867 ntBASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC28BQ9BUN5 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms