Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.15□□□□□ -1.42
VRK1Q99986 RPL23AP61-201ENST00000623642 466 ntBASIC6.15□□□□□ -1.42
VRK1Q99986 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.15□□□□□ -1.42
VRK1Q99986 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VRK1Q99986 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VRK1Q99986 AL356585.10-201ENST00000641883 123 ntBASIC6.15□□□□□ -1.42
VRK1Q99986 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VRK1Q99986 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VRK1Q99986 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.43
VRK1Q99986 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VRK1Q99986 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.43
VRK1Q99986 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.15□□□□□ -1.43
VRK1Q99986 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VRK1Q99986 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
VRK1Q99986 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VRK1Q99986 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.15□□□□□ -1.43
VRK1Q99986 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
VRK1Q99986 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.15□□□□□ -1.43
VRK1Q99986 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.15□□□□□ -1.43
VRK1Q99986 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.15□□□□□ -1.43
VRK1Q99986 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VRK1Q99986 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.15□□□□□ -1.43
VRK1Q99986 AC130360.2-201ENST00000533477 1556 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.14□□□□□ -1.43
VRK1Q99986 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VRK1Q99986 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 SNORA70.5-201ENST00000365519 135 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VRK1Q99986 AL136100.1-201ENST00000407696 330 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.14□□□□□ -1.43
VRK1Q99986 RNU4-74P-201ENST00000411280 161 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AL157698.1-201ENST00000415190 1011 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.14□□□□□ -1.43
VRK1Q99986 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 EIF4A1P1-201ENST00000420241 934 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 XKRYP1-201ENST00000423438 492 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 DUTP4-201ENST00000424782 475 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 GAPDHP69-201ENST00000425504 1008 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 XKRYP2-201ENST00000432915 492 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC009237.4-201ENST00000441078 238 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.14□□□□□ -1.43
VRK1Q99986 SRP68P2-201ENST00000456184 254 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 PSMA6P2-201ENST00000457574 686 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 RPSAP48-201ENST00000466509 889 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 RPL7L1P7-201ENST00000509986 724 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 MORF4L1P3-201ENST00000525966 950 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC124891.1-201ENST00000536322 519 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 BTG1P1-201ENST00000540396 508 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 BMS1P15-201ENST00000554269 1141 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.14□□□□□ -1.43
VRK1Q99986 AL031846.1-201ENST00000560933 314 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 MIR3135A-201ENST00000578460 77 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 MIR378H-201ENST00000579966 83 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC068020.1-201ENST00000594215 661 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC234772.3-201ENST00000602277 528 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC130352.1-201ENST00000602979 661 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AC022022.2-201ENST00000602989 360 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AL450336.1-201ENST00000605180 586 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 AL157392.4-201ENST00000609756 345 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VRK1Q99986 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.14□□□□□ -1.43
VRK1Q99986 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC099654.15-201ENST00000639802 509 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VRK1Q99986 AC011815.2-201ENST00000618230 2021 ntBASIC6.14□□□□□ -1.43
VRK1Q99986 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.14□□□□□ -1.43
VRK1Q99986 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VRK1Q99986 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
VRK1Q99986 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms