Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AKAP17BP-201ENST00000431706 2719 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 HSPA8P19-201ENST00000505359 1517 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC026310.1-201ENST00000396004 378 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AL606490.8-201ENST00000441624 319 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 HMGN1P32-201ENST00000441744 256 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC079922.1-201ENST00000443291 359 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 OR52Y1P-201ENST00000452418 828 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 C1DP3-201ENST00000455013 423 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 FCF1P6-201ENST00000456841 595 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 EIF2S2P4-201ENST00000461070 984 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 RN7SL104P-201ENST00000498686 293 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC073648.3-201ENST00000504939 925 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 RN7SKP248-201ENST00000516278 305 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 OR9G2P-201ENST00000533326 880 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AC006924.1-201ENST00000610750 559 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AL162377.2-201ENST00000624532 337 ntBASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC110716.2-201ENST00000563865 3945 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AL139184.1-202ENST00000422303 222 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC017019.1-201ENST00000426129 261 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 MTND2P25-201ENST00000449028 610 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 RPL36AP55-201ENST00000454114 305 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 RN7SL714P-201ENST00000487050 298 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 AC027338.1-201ENST00000514840 825 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 RNA5SP116-201ENST00000516132 98 ntBASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4AQ8WYN0 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms