Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 MAPK10-344ENST00000641718 3746 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC092724.1-201ENST00000624623 3397 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 RNU1-150P-201ENST00000362491 162 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 SNORA40.4-201ENST00000390971 128 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 MIR1203-201ENST00000408812 85 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC097721.1-201ENST00000427150 1253 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC064862.4-201ENST00000442180 334 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC016908.1-201ENST00000442571 1219 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AP000281.1-201ENST00000444036 316 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AL136038.1-201ENST00000497246 351 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 RNU6-551P-201ENST00000516661 103 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AP002981.1-201ENST00000517692 975 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 IGKV2-19-201ENST00000518132 283 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC007225.2-201ENST00000562529 256 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC233699.1-201ENST00000569955 1168 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC115989.2-201ENST00000578640 563 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 RPAP2P1-201ENST00000603626 1168 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC004948.1-201ENST00000609858 672 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AF117829.2-201ENST00000619538 361 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 AL357562.1-201ENST00000624911 609 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.7□□□□□ -1.18
SYNE4Q8N205 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC083899.2-201ENST00000423285 1376 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AP001541.1-201ENST00000623322 1904 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SYNE4Q8N205 AC006213.6-201ENST00000623722 4179 ntBASIC7.7□□□□□ -1.18
SYNE4Q8N205 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 USP9YP3-201ENST00000434481 1766 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AC013488.1-201ENST00000526618 1838 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 XKRY2-202ENST00000623874 1581 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 XKRY-202ENST00000624960 1581 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 FUNDC2P3-201ENST00000334716 533 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 RNA5SP478-201ENST00000364657 115 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 RN7SKP286-201ENST00000410894 299 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 RPL35AP3-201ENST00000414680 288 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 VN1R110P-201ENST00000438988 971 ntBASIC7.69□□□□□ -1.18
SYNE4Q8N205 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.69□□□□□ -1.18
SYNE4Q8N205 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms