Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RNA5SP280-201ENST00000411230 115 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 RPLP1P10-201ENST00000413972 339 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL845321.1-201ENST00000444603 348 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 RPS26P11-201ENST00000463445 348 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC107952.1-201ENST00000524200 376 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC021820.1-201ENST00000525564 808 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 OR5M6P-201ENST00000530227 937 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC004232.1-201ENST00000571388 208 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 RPS27AP19-201ENST00000597285 458 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL138960.1-201ENST00000613838 513 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC005899.6-201ENST00000620729 297 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC127071.1-201ENST00000624997 712 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AC005332.9-201ENST00000620266 2921 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 AL353743.3-201ENST00000442109 1468 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.68□□□□□ -1.5
C11orf88Q6PI97 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
C11orf88Q6PI97 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 RACGAP1P-201ENST00000550663 1879 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SNORA70.5-201ENST00000365519 135 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL136131.1-201ENST00000406079 803 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL451046.1-201ENST00000406097 534 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 MTND4LP13-201ENST00000425022 298 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 LSM3P3-201ENST00000436601 306 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SULT1D1P-201ENST00000458020 882 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 RN7SL72P-201ENST00000460697 269 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 RN7SL492P-201ENST00000460700 295 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SCARNA11.1-201ENST00000516918 132 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 OR4V1P-201ENST00000525394 1140 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 MIR5682-201ENST00000584864 76 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC004241.2-201ENST00000614562 444 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AL138693.1-201ENST00000622219 129 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC087894.3-201ENST00000623682 349 ntBASIC5.67□□□□□ -1.5
C11orf88Q6PI97 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
C11orf88Q6PI97 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms