Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 BZW1P1-201ENST00000454901 1240 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 SIAH1P1-201ENST00000479411 923 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 RNA5SP400-201ENST00000517155 111 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.43□□□□□ -1.06
PTCH1Q13635 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.43□□□□□ -1.06
PTCH1Q13635 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.43□□□□□ -1.06
PTCH1Q13635 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.43□□□□□ -1.06
PTCH1Q13635 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.43□□□□□ -1.06
PTCH1Q13635 AL445647.2-201ENST00000615170 130 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.43□□□□□ -1.06
PTCH1Q13635 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 C4BPAP1-201ENST00000415474 1893 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
PTCH1Q13635 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC8.42□□□□□ -1.06
PTCH1Q13635 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.42□□□□□ -1.06
PTCH1Q13635 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC8.42□□□□□ -1.06
PTCH1Q13635 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTCH1Q13635 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.42□□□□□ -1.06
PTCH1Q13635 OTX2P1-201ENST00000450956 354 ntBASIC8.42□□□□□ -1.06
PTCH1Q13635 AL133445.1-201ENST00000467051 452 ntBASIC8.42□□□□□ -1.06
PTCH1Q13635 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
PTCH1Q13635 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.42□□□□□ -1.06
PTCH1Q13635 OR5M14P-201ENST00000506803 618 ntBASIC8.42□□□□□ -1.06
PTCH1Q13635 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.42□□□□□ -1.06
PTCH1Q13635 OR10G5P-201ENST00000532733 358 ntBASIC8.42□□□□□ -1.06
PTCH1Q13635 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.42□□□□□ -1.06
PTCH1Q13635 RNU4ATAC-201ENST00000580972 127 ntBASIC8.42□□□□□ -1.06
PTCH1Q13635 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC8.42□□□□□ -1.06
PTCH1Q13635 AC022905.1-201ENST00000503430 3048 ntBASIC8.42□□□□□ -1.06
PTCH1Q13635 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.42□□□□□ -1.06
PTCH1Q13635 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.42□□□□□ -1.06
PTCH1Q13635 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.42□□□□□ -1.06
PTCH1Q13635 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTCH1Q13635 AC013488.1-201ENST00000526618 1838 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 AC008937.3-201ENST00000606813 1700 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.41□□□□□ -1.06
PTCH1Q13635 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
PTCH1Q13635 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PTCH1Q13635 RPL36P18-201ENST00000419316 318 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PTCH1Q13635 RPS7P3-201ENST00000443360 580 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.41□□□□□ -1.06
PTCH1Q13635 RN7SL72P-201ENST00000460697 269 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 RN7SL329P-201ENST00000467740 299 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 RN7SL57P-201ENST00000493687 290 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 NDUFA5P12-201ENST00000503796 343 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.41□□□□□ -1.06
PTCH1Q13635 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.41□□□□□ -1.06
PTCH1Q13635 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC8.41□□□□□ -1.06
PTCH1Q13635 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.41□□□□□ -1.06
PTCH1Q13635 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.41□□□□□ -1.06
PTCH1Q13635 MIR4505-201ENST00000582238 73 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.41□□□□□ -1.06
PTCH1Q13635 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 AC087565.3-203ENST00000641018 837 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.41□□□□□ -1.06
PTCH1Q13635 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.41□□□□□ -1.06
PTCH1Q13635 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.41□□□□□ -1.06
PTCH1Q13635 AL008638.3-201ENST00000623027 5182 ntBASIC8.41□□□□□ -1.06
PTCH1Q13635 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.41□□□□□ -1.06
PTCH1Q13635 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
PTCH1Q13635 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PTCH1Q13635 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.4□□□□□ -1.06
PTCH1Q13635 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC8.4□□□□□ -1.06
PTCH1Q13635 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PTCH1Q13635 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 AC112243.1-201ENST00000623949 3851 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 MTHFD2P5-201ENST00000320415 844 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 RNA5SP478-201ENST00000364657 115 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 RN7SKP124-201ENST00000364730 341 ntBASIC8.4□□□□□ -1.06
PTCH1Q13635 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.4□□□□□ -1.06
PTCH1Q13635 FABP5P2-201ENST00000439042 408 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms