Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 RNU1-134P-201ENST00000362935 165 ntBASIC6.32□□□□□ -1.4
CDH4P55283 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH4P55283 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 SNORA51.9-201ENST00000384295 124 ntBASIC6.32□□□□□ -1.4
CDH4P55283 MIR621-201ENST00000384919 96 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AP003170.5-201ENST00000397185 335 ntBASIC6.32□□□□□ -1.4
CDH4P55283 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 RPL7P58-201ENST00000402913 758 ntBASIC6.32□□□□□ -1.4
CDH4P55283 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 RNA5SP115-201ENST00000411160 107 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH4P55283 RPL35AP31-201ENST00000418340 337 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC007568.1-201ENST00000422912 471 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AK3P5-201ENST00000432033 519 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC069154.1-201ENST00000432914 542 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 SEPT14P12-201ENST00000442280 560 ntBASIC6.32□□□□□ -1.4
CDH4P55283 RBMY2AP-201ENST00000445405 1157 ntBASIC6.32□□□□□ -1.4
CDH4P55283 RBMY2CP-201ENST00000448575 1157 ntBASIC6.32□□□□□ -1.4
CDH4P55283 RBMY2DP-202ENST00000448881 1157 ntBASIC6.32□□□□□ -1.4
CDH4P55283 RBMY2BP-202ENST00000451071 1156 ntBASIC6.32□□□□□ -1.4
CDH4P55283 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH4P55283 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH4P55283 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH4P55283 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 RN7SKP35-201ENST00000517210 151 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 BCAS2P1-201ENST00000528022 632 ntBASIC6.32□□□□□ -1.4
CDH4P55283 TOMM20P1-201ENST00000534518 427 ntBASIC6.32□□□□□ -1.4
CDH4P55283 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH4P55283 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 OR4H6P-201ENST00000563771 921 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH4P55283 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH4P55283 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 AL034374.2-201ENST00000605281 548 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC092266.1-201ENST00000610958 165 ntBASIC6.32□□□□□ -1.4
CDH4P55283 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.32□□□□□ -1.4
CDH4P55283 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.32□□□□□ -1.4
CDH4P55283 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CDH4P55283 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.32□□□□□ -1.4
CDH4P55283 IFIT1P1-201ENST00000400497 1449 ntBASIC6.32□□□□□ -1.4
CDH4P55283 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CDH4P55283 NR1H5P-201ENST00000452683 1377 ntBASIC6.31□□□□□ -1.4
CDH4P55283 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CDH4P55283 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 COX6B1P3-201ENST00000312310 260 ntBASIC6.31□□□□□ -1.4
CDH4P55283 FUNDC2P3-201ENST00000334716 533 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 KATNBL1P2-201ENST00000433311 835 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 AC023141.3-201ENST00000436698 278 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AL353662.1-201ENST00000439099 327 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 Z83838.1-202ENST00000456225 839 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AC073594.1-201ENST00000462065 364 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AP002884.1-201ENST00000479691 655 ntBASIC6.31□□□□□ -1.4
CDH4P55283 RBBP4P1-201ENST00000502424 1276 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 LDHBP3-201ENST00000514909 822 ntBASIC6.31□□□□□ -1.4
CDH4P55283 IGKV3D-25-201ENST00000519599 235 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH4P55283 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.31□□□□□ -1.4
CDH4P55283 AC134669.1-201ENST00000581275 672 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.31□□□□□ -1.4
CDH4P55283 AC073333.2-201ENST00000603589 769 ntBASIC6.31□□□□□ -1.4
CDH4P55283 AC141002.1-201ENST00000607025 279 ntBASIC6.31□□□□□ -1.4
CDH4P55283 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH4P55283 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.31□□□□□ -1.4
CDH4P55283 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH4P55283 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.31□□□□□ -1.4
CDH4P55283 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CDH4P55283 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms