Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
APOBEC1P41238 YWHAZP4-201ENST00000392459 708 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AC003045.1-201ENST00000398779 713 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 PSMA6P1-201ENST00000400275 741 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC007568.1-201ENST00000422912 471 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 NDUFA5P1-201ENST00000433858 341 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AL392003.1-201ENST00000434394 243 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 RPL12P49-201ENST00000441100 121 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 GTF2IP14-201ENST00000441415 586 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 COX4I1P2-201ENST00000447446 547 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 RN7SL326P-201ENST00000477493 296 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.72□□□□□ -1.49
APOBEC1P41238 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 KCTD9P6-201ENST00000522306 950 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.72□□□□□ -1.49
APOBEC1P41238 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.72□□□□□ -1.49
APOBEC1P41238 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 RN7SL475P-201ENST00000583379 298 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AL049840.6-201ENST00000604583 345 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AL136370.1-201ENST00000608166 691 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AC006924.1-201ENST00000610750 559 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC022726.2-201ENST00000634673 547 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 LINC01613-201ENST00000561476 2780 ntBASIC5.72□□□□□ -1.49
APOBEC1P41238 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
APOBEC1P41238 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
APOBEC1P41238 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
APOBEC1P41238 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
APOBEC1P41238 AC073365.1-203ENST00000641055 1992 ntBASIC5.71□□□□□ -1.49
APOBEC1P41238 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.71□□□□□ -1.49
APOBEC1P41238 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOBEC1P41238 MIR433-201ENST00000384837 93 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 MIR191-201ENST00000384873 92 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 RNU11-6P-201ENST00000391127 133 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.71□□□□□ -1.5
APOBEC1P41238 DHFRP2-201ENST00000414224 547 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 SETP10-201ENST00000424368 814 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 AL590623.1-201ENST00000427864 105 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.71□□□□□ -1.5
APOBEC1P41238 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.71□□□□□ -1.5
APOBEC1P41238 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
APOBEC1P41238 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.71□□□□□ -1.5
APOBEC1P41238 AL022237.1-201ENST00000446663 358 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 OR52I1-201ENST00000450052 1050 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
APOBEC1P41238 RN7SL165P-201ENST00000477476 291 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.71□□□□□ -1.5
APOBEC1P41238 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.71□□□□□ -1.5
APOBEC1P41238 RNA5SP400-201ENST00000517155 111 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.71□□□□□ -1.5
APOBEC1P41238 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.71□□□□□ -1.5
APOBEC1P41238 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
APOBEC1P41238 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.71□□□□□ -1.5
APOBEC1P41238 MTND2P17-201ENST00000550281 688 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.71□□□□□ -1.5
APOBEC1P41238 TMF1P1-201ENST00000576058 373 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOBEC1P41238 NDUFB9P1-201ENST00000604683 510 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.71□□□□□ -1.5
APOBEC1P41238 RPL21P136-201ENST00000605378 396 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 OR7M1P-201ENST00000608946 533 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 AL122023.1-201ENST00000622847 530 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.71□□□□□ -1.5
APOBEC1P41238 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.71□□□□□ -1.5
APOBEC1P41238 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.71□□□□□ -1.5
APOBEC1P41238 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
APOBEC1P41238 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOBEC1P41238 AL359976.1-201ENST00000418655 3528 ntBASIC5.71□□□□□ -1.5
APOBEC1P41238 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
APOBEC1P41238 AC011504.1-201ENST00000623331 4103 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms