Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR6721-201ENST00000617181 87 ntBASIC5.65□□□□□ -1.5
SHC1P29353 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.65□□□□□ -1.5
SHC1P29353 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHC1P29353 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 EIF3EP1-201ENST00000433978 1316 ntBASIC5.65□□□□□ -1.51
SHC1P29353 SAMMSON-210ENST00000641260 1308 ntBASIC5.65□□□□□ -1.51
SHC1P29353 AP001157.1-201ENST00000550837 2339 ntBASIC5.65□□□□□ -1.51
SHC1P29353 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.65□□□□□ -1.51
SHC1P29353 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SHC1P29353 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHC1P29353 USP9YP3-201ENST00000434481 1766 ntBASIC5.65□□□□□ -1.51
SHC1P29353 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
SHC1P29353 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 AC092724.1-201ENST00000624623 3397 ntBASIC5.64□□□□□ -1.51
SHC1P29353 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHC1P29353 AL121835.1-201ENST00000404250 354 ntBASIC5.64□□□□□ -1.51
SHC1P29353 RN7SKP86-201ENST00000410454 332 ntBASIC5.64□□□□□ -1.51
SHC1P29353 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.64□□□□□ -1.51
SHC1P29353 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 AC079922.1-201ENST00000443291 359 ntBASIC5.64□□□□□ -1.51
SHC1P29353 POU5F1P5-201ENST00000445059 658 ntBASIC5.64□□□□□ -1.51
SHC1P29353 AC007383.1-201ENST00000445875 636 ntBASIC5.64□□□□□ -1.51
SHC1P29353 EEF1B2P3-201ENST00000447718 678 ntBASIC5.64□□□□□ -1.51
SHC1P29353 RN7SL326P-201ENST00000477493 296 ntBASIC5.64□□□□□ -1.51
SHC1P29353 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.64□□□□□ -1.51
SHC1P29353 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.64□□□□□ -1.51
SHC1P29353 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.64□□□□□ -1.51
SHC1P29353 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.64□□□□□ -1.51
SHC1P29353 AC036111.2-201ENST00000533247 901 ntBASIC5.64□□□□□ -1.51
SHC1P29353 AP001858.2-201ENST00000536213 601 ntBASIC5.64□□□□□ -1.51
SHC1P29353 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.64□□□□□ -1.51
SHC1P29353 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.64□□□□□ -1.51
SHC1P29353 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.64□□□□□ -1.51
SHC1P29353 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.64□□□□□ -1.51
SHC1P29353 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 AC010998.3-201ENST00000613871 631 ntBASIC5.64□□□□□ -1.51
SHC1P29353 uc_338.31-201ENST00000615595 186 ntBASIC5.64□□□□□ -1.51
SHC1P29353 AC107308.1-201ENST00000615897 301 ntBASIC5.64□□□□□ -1.51
SHC1P29353 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.64□□□□□ -1.51
SHC1P29353 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SHC1P29353 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHC1P29353 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.64□□□□□ -1.51
SHC1P29353 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.63□□□□□ -1.51
SHC1P29353 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHC1P29353 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 ZNF969P-201ENST00000510345 2341 ntBASIC5.63□□□□□ -1.51
SHC1P29353 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SHC1P29353 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHC1P29353 RNA5SP110-201ENST00000362638 115 ntBASIC5.63□□□□□ -1.51
SHC1P29353 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.63□□□□□ -1.51
SHC1P29353 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 TRGV5P-201ENST00000419915 354 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC099782.1-201ENST00000425889 474 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC021876.1-201ENST00000425959 359 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC108479.1-201ENST00000431142 427 ntBASIC5.63□□□□□ -1.51
SHC1P29353 CLNS1AP1-201ENST00000435954 682 ntBASIC5.63□□□□□ -1.51
SHC1P29353 LDHAP2-201ENST00000437325 985 ntBASIC5.63□□□□□ -1.51
SHC1P29353 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.63□□□□□ -1.51
SHC1P29353 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.63□□□□□ -1.51
SHC1P29353 AL645936.1-201ENST00000441979 518 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms