Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RANP2-201ENST00000456833 229 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 RNA5SP418-201ENST00000515951 117 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 TDGP1-201ENST00000543961 1229 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC009729.1-201ENST00000548873 1133 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC023968.1-201ENST00000560719 475 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC025283.1-201ENST00000572039 734 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 NPIPB1P-202ENST00000588786 828 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AL360012.1-201ENST00000602813 131 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC005828.7-201ENST00000607331 556 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC018690.1-201ENST00000608144 626 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 MIR7159-201ENST00000620587 66 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AC116667.2-201ENST00000641075 823 ntBASIC4.73□□□□□ -1.65
HLA-DMBP28068 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DMBP28068 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DMBP28068 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DMBP28068 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DMBP28068 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC140479.2-201ENST00000421567 3130 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC003045.1-201ENST00000398779 713 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 VIM2P-201ENST00000402383 1294 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 SNORA11.5-201ENST00000408163 128 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 RN7SKP129-201ENST00000410288 299 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AL359885.1-201ENST00000415786 903 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 THEM7P-201ENST00000419556 672 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 RPL24P2-201ENST00000421023 475 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 RPSAP32-201ENST00000432681 526 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 RARRES2P3-201ENST00000457739 473 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 RN7SL168P-201ENST00000463821 279 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 RPS27P20-201ENST00000492051 246 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC124891.1-201ENST00000536322 519 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 RPL3P13-201ENST00000550415 216 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC121758.1-202ENST00000556917 658 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 MT1CP-201ENST00000567054 174 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC090651.1-201ENST00000567865 634 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC027334.1-201ENST00000603257 310 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AC011891.2-201ENST00000604949 397 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AL589743.6-201ENST00000611025 117 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 AL596275.2-207ENST00000641188 675 ntBASIC4.72□□□□□ -1.65
HLA-DMBP28068 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DMBP28068 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DMBP28068 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 368 ms