Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.2□□□□□ -1.42
PCNAP12004 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.2□□□□□ -1.42
PCNAP12004 SYPL1P2-201ENST00000582878 727 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.2□□□□□ -1.42
PCNAP12004 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 AL008582.1-201ENST00000609612 442 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AP005131.7-201ENST00000610087 611 ntBASIC6.2□□□□□ -1.42
PCNAP12004 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.2□□□□□ -1.42
PCNAP12004 AC027575.3-201ENST00000583058 2747 ntBASIC6.2□□□□□ -1.42
PCNAP12004 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
PCNAP12004 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCNAP12004 AL359976.1-201ENST00000418655 3528 ntBASIC6.2□□□□□ -1.42
PCNAP12004 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
PCNAP12004 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.2□□□□□ -1.42
PCNAP12004 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.19□□□□□ -1.42
PCNAP12004 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCNAP12004 UGT2B24P-201ENST00000514441 1597 ntBASIC6.19□□□□□ -1.42
PCNAP12004 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 AC005702.3-201ENST00000585345 1447 ntBASIC6.19□□□□□ -1.42
PCNAP12004 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCNAP12004 RN7SKP221-201ENST00000410420 301 ntBASIC6.19□□□□□ -1.42
PCNAP12004 RNA5SP251-201ENST00000410614 137 ntBASIC6.19□□□□□ -1.42
PCNAP12004 MTND2P11-201ENST00000423638 648 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.19□□□□□ -1.42
PCNAP12004 MGAT2P2-201ENST00000427194 797 ntBASIC6.19□□□□□ -1.42
PCNAP12004 RPS19P6-201ENST00000441327 433 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AL500527.1-201ENST00000448532 255 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AL034369.1-201ENST00000453808 477 ntBASIC6.19□□□□□ -1.42
PCNAP12004 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PCNAP12004 HMGN1P8-201ENST00000463578 288 ntBASIC6.19□□□□□ -1.42
PCNAP12004 RN7SL413P-201ENST00000482700 297 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.19□□□□□ -1.42
PCNAP12004 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.19□□□□□ -1.42
PCNAP12004 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.19□□□□□ -1.42
PCNAP12004 AC112184.1-201ENST00000505179 312 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AC026782.2-201ENST00000510845 636 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.19□□□□□ -1.42
PCNAP12004 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.19□□□□□ -1.42
PCNAP12004 AP005639.1-201ENST00000526939 192 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.19□□□□□ -1.42
PCNAP12004 AC073916.1-201ENST00000545095 130 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AC090115.2-201ENST00000548060 883 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.19□□□□□ -1.42
PCNAP12004 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.19□□□□□ -1.42
PCNAP12004 AC233702.7-202ENST00000582941 211 ntBASIC6.19□□□□□ -1.42
PCNAP12004 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.19□□□□□ -1.42
PCNAP12004 AL137246.2-201ENST00000613439 662 ntBASIC6.19□□□□□ -1.42
PCNAP12004 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 AC024255.1-201ENST00000614376 102 ntBASIC6.19□□□□□ -1.42
PCNAP12004 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 MIR6503-201ENST00000622884 86 ntBASIC6.19□□□□□ -1.42
PCNAP12004 HPVC1-201ENST00000629899 1198 ntBASIC6.19□□□□□ -1.42
PCNAP12004 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 AL163152.1-201ENST00000642001 374 ntBASIC6.19□□□□□ -1.42
PCNAP12004 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.19□□□□□ -1.42
PCNAP12004 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
PCNAP12004 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCNAP12004 AL731532.1-201ENST00000623972 4236 ntBASIC6.19□□□□□ -1.42
PCNAP12004 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCNAP12004 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.18□□□□□ -1.42
PCNAP12004 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.18□□□□□ -1.42
PCNAP12004 AL592429.1-201ENST00000403909 1473 ntBASIC6.18□□□□□ -1.42
PCNAP12004 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCNAP12004 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCNAP12004 SNORD35A-201ENST00000363389 86 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AL033519.1-201ENST00000407266 307 ntBASIC6.18□□□□□ -1.42
PCNAP12004 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.18□□□□□ -1.42
PCNAP12004 RN7SKP281-201ENST00000410472 352 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 Z85994.2-201ENST00000434327 452 ntBASIC6.18□□□□□ -1.42
PCNAP12004 MAPRE1P3-201ENST00000435438 796 ntBASIC6.18□□□□□ -1.42
PCNAP12004 COL11A2P1-205ENST00000441798 676 ntBASIC6.18□□□□□ -1.42
PCNAP12004 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms