Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.72□□□□□ -1.33
TPM1P09493 AL133399.1-201ENST00000527476 298 ntBASIC6.72□□□□□ -1.33
TPM1P09493 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM1P09493 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC6.72□□□□□ -1.33
TPM1P09493 RPL29P33-201ENST00000587474 316 ntBASIC6.72□□□□□ -1.33
TPM1P09493 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.72□□□□□ -1.33
TPM1P09493 LSM1P2-201ENST00000604911 322 ntBASIC6.72□□□□□ -1.33
TPM1P09493 AL137067.2-201ENST00000621202 131 ntBASIC6.72□□□□□ -1.33
TPM1P09493 AP000550.3-201ENST00000637734 379 ntBASIC6.72□□□□□ -1.33
TPM1P09493 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
TPM1P09493 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.72□□□□□ -1.33
TPM1P09493 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM1P09493 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.72□□□□□ -1.33
TPM1P09493 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TPM1P09493 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TPM1P09493 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TPM1P09493 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TPM1P09493 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TPM1P09493 AC079248.1-201ENST00000427568 1546 ntBASIC6.71□□□□□ -1.33
TPM1P09493 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
TPM1P09493 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
TPM1P09493 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.33
TPM1P09493 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TPM1P09493 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TPM1P09493 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 AP005435.3-201ENST00000531260 3198 ntBASIC6.71□□□□□ -1.34
TPM1P09493 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TPM1P09493 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TPM1P09493 MIR301B-201ENST00000390813 78 ntBASIC6.71□□□□□ -1.34
TPM1P09493 RPL12P23-201ENST00000405880 490 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.71□□□□□ -1.34
TPM1P09493 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM1P09493 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.71□□□□□ -1.34
TPM1P09493 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 BX276092.6-201ENST00000430476 250 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AC073410.1-201ENST00000435125 589 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AL645939.3-201ENST00000435408 225 ntBASIC6.71□□□□□ -1.34
TPM1P09493 EMC3-AS1-205ENST00000438698 534 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AL356133.1-201ENST00000444762 372 ntBASIC6.71□□□□□ -1.34
TPM1P09493 BX276092.8-201ENST00000455722 250 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AL079303.1-201ENST00000486611 463 ntBASIC6.71□□□□□ -1.34
TPM1P09493 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM1P09493 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
TPM1P09493 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM1P09493 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.71□□□□□ -1.34
TPM1P09493 AC023080.1-201ENST00000551663 931 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AC089984.3-201ENST00000552838 363 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.71□□□□□ -1.34
TPM1P09493 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.71□□□□□ -1.34
TPM1P09493 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 MIR6726-201ENST00000613751 61 ntBASIC6.71□□□□□ -1.34
TPM1P09493 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
TPM1P09493 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.71□□□□□ -1.34
TPM1P09493 OR7A1P-202ENST00000641542 1158 ntBASIC6.71□□□□□ -1.34
TPM1P09493 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 AC009220.2-201ENST00000489759 1751 ntBASIC6.71□□□□□ -1.34
TPM1P09493 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
TPM1P09493 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TPM1P09493 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM1P09493 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM1P09493 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM1P09493 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM1P09493 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 OR7A2P-201ENST00000304105 930 ntBASIC6.7□□□□□ -1.34
TPM1P09493 AC026310.1-201ENST00000396004 378 ntBASIC6.7□□□□□ -1.34
TPM1P09493 PEX12P1-201ENST00000400284 1048 ntBASIC6.7□□□□□ -1.34
TPM1P09493 RN7SKP205-201ENST00000410999 307 ntBASIC6.7□□□□□ -1.34
TPM1P09493 GAPDHP23-201ENST00000444823 993 ntBASIC6.7□□□□□ -1.34
TPM1P09493 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.7□□□□□ -1.34
TPM1P09493 AC018645.1-201ENST00000505003 109 ntBASIC6.7□□□□□ -1.34
TPM1P09493 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 GTF2IP11-201ENST00000526931 420 ntBASIC6.7□□□□□ -1.34
TPM1P09493 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM1P09493 AL589743.6-201ENST00000611025 117 ntBASIC6.7□□□□□ -1.34
TPM1P09493 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM1P09493 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.7□□□□□ -1.34
TPM1P09493 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.7□□□□□ -1.34
TPM1P09493 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TPM1P09493 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms