Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 BX284632.2-201ENST00000421091 399 ntBASIC6.7□□□□□ -1.34
RB1P06400 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.7□□□□□ -1.34
RB1P06400 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 VN1R110P-201ENST00000438988 971 ntBASIC6.7□□□□□ -1.34
RB1P06400 TRIM60P16-201ENST00000444048 694 ntBASIC6.7□□□□□ -1.34
RB1P06400 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 MYO5BP2-201ENST00000449815 1277 ntBASIC6.7□□□□□ -1.34
RB1P06400 AP006222.1-205ENST00000450734 457 ntBASIC6.7□□□□□ -1.34
RB1P06400 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.7□□□□□ -1.34
RB1P06400 RN7SL834P-201ENST00000461450 286 ntBASIC6.7□□□□□ -1.34
RB1P06400 AC026254.2-201ENST00000475295 371 ntBASIC6.7□□□□□ -1.34
RB1P06400 AC091965.3-201ENST00000506236 208 ntBASIC6.7□□□□□ -1.34
RB1P06400 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.7□□□□□ -1.34
RB1P06400 IGHV3-57-201ENST00000520143 280 ntBASIC6.7□□□□□ -1.34
RB1P06400 AP000648.1-201ENST00000529682 397 ntBASIC6.7□□□□□ -1.34
RB1P06400 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.7□□□□□ -1.34
RB1P06400 AC027544.3-201ENST00000535082 757 ntBASIC6.7□□□□□ -1.34
RB1P06400 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.7□□□□□ -1.34
RB1P06400 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.7□□□□□ -1.34
RB1P06400 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.7□□□□□ -1.34
RB1P06400 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 AL031601.1-201ENST00000605702 394 ntBASIC6.7□□□□□ -1.34
RB1P06400 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 MRPL57P1-201ENST00000621486 265 ntBASIC6.7□□□□□ -1.34
RB1P06400 AP003400.2-201ENST00000624036 666 ntBASIC6.7□□□□□ -1.34
RB1P06400 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.7□□□□□ -1.34
RB1P06400 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 CASC19-243ENST00000641588 1546 ntBASIC6.7□□□□□ -1.34
RB1P06400 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RB1P06400 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RB1P06400 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RB1P06400 MAPK10-323ENST00000641493 3207 ntBASIC6.69□□□□□ -1.34
RB1P06400 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.69□□□□□ -1.34
RB1P06400 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RB1P06400 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
RB1P06400 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 MIR1203-201ENST00000408812 85 ntBASIC6.69□□□□□ -1.34
RB1P06400 RN7SKP286-201ENST00000410894 299 ntBASIC6.69□□□□□ -1.34
RB1P06400 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.69□□□□□ -1.34
RB1P06400 GTF3AP1-201ENST00000416942 1004 ntBASIC6.69□□□□□ -1.34
RB1P06400 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.69□□□□□ -1.34
RB1P06400 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.69□□□□□ -1.34
RB1P06400 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.69□□□□□ -1.34
RB1P06400 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.69□□□□□ -1.34
RB1P06400 RN7SL193P-201ENST00000491708 276 ntBASIC6.69□□□□□ -1.34
RB1P06400 AC008945.1-201ENST00000505144 499 ntBASIC6.69□□□□□ -1.34
RB1P06400 AC008638.1-201ENST00000506035 866 ntBASIC6.69□□□□□ -1.34
RB1P06400 IGKV1D-22-201ENST00000518953 324 ntBASIC6.69□□□□□ -1.34
RB1P06400 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.69□□□□□ -1.34
RB1P06400 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.69□□□□□ -1.34
RB1P06400 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.69□□□□□ -1.34
RB1P06400 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.69□□□□□ -1.34
RB1P06400 AC091078.2-201ENST00000557145 559 ntBASIC6.69□□□□□ -1.34
RB1P06400 DPPA3P2-202ENST00000557188 1219 ntBASIC6.69□□□□□ -1.34
RB1P06400 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.69□□□□□ -1.34
RB1P06400 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.69□□□□□ -1.34
RB1P06400 AC005244.1-201ENST00000582566 339 ntBASIC6.69□□□□□ -1.34
RB1P06400 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.69□□□□□ -1.34
RB1P06400 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.69□□□□□ -1.34
RB1P06400 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.69□□□□□ -1.34
RB1P06400 MIR7159-201ENST00000620587 66 ntBASIC6.69□□□□□ -1.34
RB1P06400 AC012653.2-201ENST00000621880 420 ntBASIC6.69□□□□□ -1.34
RB1P06400 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RB1P06400 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 RBMY1HP-201ENST00000382759 1389 ntBASIC6.69□□□□□ -1.34
RB1P06400 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RB1P06400 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 AL133243.2-201ENST00000610331 1621 ntBASIC6.68□□□□□ -1.34
RB1P06400 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 AL359976.1-201ENST00000418655 3528 ntBASIC6.68□□□□□ -1.34
RB1P06400 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.68□□□□□ -1.34
RB1P06400 AC005261.2-201ENST00000593427 4258 ntBASIC6.68□□□□□ -1.34
RB1P06400 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.68□□□□□ -1.34
RB1P06400 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RB1P06400 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms