Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 OR56A7P-201ENST00000524865 941 ntBASIC6□□□□□ -1.45
TNFP01375 KCTD9P4-201ENST00000526766 1166 ntBASIC6□□□□□ -1.45
TNFP01375 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6□□□□□ -1.45
TNFP01375 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6□□□□□ -1.45
TNFP01375 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 AC096861.1-201ENST00000616652 240 ntBASIC6□□□□□ -1.45
TNFP01375 AC026124.2-201ENST00000621847 656 ntBASIC6□□□□□ -1.45
TNFP01375 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 AC116667.2-201ENST00000641075 823 ntBASIC6□□□□□ -1.45
TNFP01375 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6□□□□□ -1.45
TNFP01375 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TNFP01375 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6□□□□□ -1.45
TNFP01375 AC009135.2-201ENST00000624136 1768 ntBASIC6□□□□□ -1.45
TNFP01375 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6□□□□□ -1.45
TNFP01375 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
TNFP01375 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFP01375 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFP01375 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFP01375 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFP01375 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFP01375 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 AC009779.8-201ENST00000641684 4384 ntBASIC5.99□□□□□ -1.45
TNFP01375 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFP01375 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFP01375 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 AL391261.1-201ENST00000555712 1479 ntBASIC5.99□□□□□ -1.45
TNFP01375 RNA5SP273-201ENST00000362484 113 ntBASIC5.99□□□□□ -1.45
TNFP01375 RNU105B-201ENST00000364478 208 ntBASIC5.99□□□□□ -1.45
TNFP01375 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.99□□□□□ -1.45
TNFP01375 LYPLA1P3-201ENST00000402650 695 ntBASIC5.99□□□□□ -1.45
TNFP01375 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 AC245884.2-201ENST00000426257 404 ntBASIC5.99□□□□□ -1.45
TNFP01375 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFP01375 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.99□□□□□ -1.45
TNFP01375 AC073594.1-201ENST00000462065 364 ntBASIC5.99□□□□□ -1.45
TNFP01375 AC114728.1-201ENST00000488289 483 ntBASIC5.99□□□□□ -1.45
TNFP01375 AC083795.1-201ENST00000491760 320 ntBASIC5.99□□□□□ -1.45
TNFP01375 Y_RNA.667-201ENST00000516212 107 ntBASIC5.99□□□□□ -1.45
TNFP01375 WBP1LP3-201ENST00000523033 208 ntBASIC5.99□□□□□ -1.45
TNFP01375 AP005639.1-201ENST00000526939 192 ntBASIC5.99□□□□□ -1.45
TNFP01375 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFP01375 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFP01375 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFP01375 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 MIR3189-201ENST00000578735 73 ntBASIC5.99□□□□□ -1.45
TNFP01375 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFP01375 AC091193.1-201ENST00000604640 448 ntBASIC5.99□□□□□ -1.45
TNFP01375 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.99□□□□□ -1.45
TNFP01375 AL136228.1-201ENST00000622221 319 ntBASIC5.99□□□□□ -1.45
TNFP01375 AC008691.1-209ENST00000642094 814 ntBASIC5.99□□□□□ -1.45
TNFP01375 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TNFP01375 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
TNFP01375 RBPJP7-201ENST00000442803 1447 ntBASIC5.99□□□□□ -1.45
TNFP01375 RBPJP5-201ENST00000449433 1447 ntBASIC5.99□□□□□ -1.45
TNFP01375 AL031651.1-201ENST00000615357 1438 ntBASIC5.99□□□□□ -1.45
TNFP01375 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TNFP01375 GNL2P1-201ENST00000451274 2190 ntBASIC5.99□□□□□ -1.45
TNFP01375 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.98□□□□□ -1.45
TNFP01375 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TNFP01375 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TNFP01375 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFP01375 AC092642.1-201ENST00000392417 425 ntBASIC5.98□□□□□ -1.45
TNFP01375 RPS15AP30-201ENST00000420976 390 ntBASIC5.98□□□□□ -1.45
TNFP01375 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.98□□□□□ -1.45
TNFP01375 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.98□□□□□ -1.45
TNFP01375 AL445466.1-201ENST00000448432 357 ntBASIC5.98□□□□□ -1.45
TNFP01375 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.98□□□□□ -1.45
TNFP01375 AC016027.4-201ENST00000450866 277 ntBASIC5.98□□□□□ -1.45
TNFP01375 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.98□□□□□ -1.45
TNFP01375 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.98□□□□□ -1.45
TNFP01375 RN7SL193P-201ENST00000491708 276 ntBASIC5.98□□□□□ -1.45
TNFP01375 SETP21-201ENST00000514799 892 ntBASIC5.98□□□□□ -1.45
TNFP01375 IGLVIV-64-201ENST00000518581 301 ntBASIC5.98□□□□□ -1.45
TNFP01375 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.98□□□□□ -1.45
TNFP01375 AC008521.2-201ENST00000591021 259 ntBASIC5.98□□□□□ -1.45
TNFP01375 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms