Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SSX4O60224 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.79□□□□□ -1.48
SSX4O60224 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SSX4O60224 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SSX4O60224 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX4O60224 AL592429.1-201ENST00000403909 1473 ntBASIC5.78□□□□□ -1.48
SSX4O60224 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.78□□□□□ -1.48
SSX4O60224 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX4O60224 AL359955.1-201ENST00000455242 3275 ntBASIC5.78□□□□□ -1.48
SSX4O60224 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SSX4O60224 RNA5SP232-201ENST00000364144 119 ntBASIC5.78□□□□□ -1.48
SSX4O60224 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX4O60224 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 RPL12P43-201ENST00000420608 499 ntBASIC5.78□□□□□ -1.48
SSX4O60224 AL139158.1-201ENST00000424719 340 ntBASIC5.78□□□□□ -1.48
SSX4O60224 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 AL590128.1-201ENST00000433407 286 ntBASIC5.78□□□□□ -1.48
SSX4O60224 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.78□□□□□ -1.48
SSX4O60224 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 MTND3P4-201ENST00000453537 303 ntBASIC5.78□□□□□ -1.48
SSX4O60224 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 AC118758.1-202ENST00000454719 225 ntBASIC5.78□□□□□ -1.48
SSX4O60224 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX4O60224 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.78□□□□□ -1.48
SSX4O60224 AC122713.1-201ENST00000518368 1015 ntBASIC5.78□□□□□ -1.48
SSX4O60224 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.78□□□□□ -1.48
SSX4O60224 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 GTF2IP11-201ENST00000526931 420 ntBASIC5.78□□□□□ -1.48
SSX4O60224 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 AC037479.1-201ENST00000558361 625 ntBASIC5.78□□□□□ -1.48
SSX4O60224 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 OOSP1P2-201ENST00000579644 351 ntBASIC5.78□□□□□ -1.48
SSX4O60224 CTSLP2-201ENST00000580501 394 ntBASIC5.78□□□□□ -1.48
SSX4O60224 MIR4271-201ENST00000582451 67 ntBASIC5.78□□□□□ -1.48
SSX4O60224 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 AC012467.1-201ENST00000607740 256 ntBASIC5.78□□□□□ -1.48
SSX4O60224 AL118508.4-201ENST00000624142 1176 ntBASIC5.78□□□□□ -1.48
SSX4O60224 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX4O60224 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.78□□□□□ -1.48
SSX4O60224 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SSX4O60224 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SSX4O60224 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.78□□□□□ -1.48
SSX4O60224 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
SSX4O60224 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.77□□□□□ -1.48
SSX4O60224 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.77□□□□□ -1.48
SSX4O60224 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
SSX4O60224 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX4O60224 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SSX4O60224 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.77□□□□□ -1.49
SSX4O60224 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 OR5T3-201ENST00000303059 1023 ntBASIC5.77□□□□□ -1.49
SSX4O60224 RNA5SP85-201ENST00000365378 119 ntBASIC5.77□□□□□ -1.49
SSX4O60224 PPIAP26-201ENST00000377951 522 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.77□□□□□ -1.49
SSX4O60224 GAPDHP57-201ENST00000424400 585 ntBASIC5.77□□□□□ -1.49
SSX4O60224 Z85994.2-201ENST00000434327 452 ntBASIC5.77□□□□□ -1.49
SSX4O60224 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX4O60224 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.77□□□□□ -1.49
SSX4O60224 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 AC083806.1-201ENST00000468934 316 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.77□□□□□ -1.49
SSX4O60224 AC093816.1-201ENST00000515076 913 ntBASIC5.77□□□□□ -1.49
SSX4O60224 Vault.2-201ENST00000516519 98 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX4O60224 MT1CP-201ENST00000567054 174 ntBASIC5.77□□□□□ -1.49
SSX4O60224 MIR3154-201ENST00000577829 84 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.77□□□□□ -1.49
SSX4O60224 NPM1P45-201ENST00000583151 559 ntBASIC5.77□□□□□ -1.49
SSX4O60224 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SSX4O60224 AC020914.7-201ENST00000594477 545 ntBASIC5.77□□□□□ -1.49
SSX4O60224 WBP1LP12-201ENST00000604449 331 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms