Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC188H7C350 RNA5SP418-201ENST00000515951 117 ntBASIC6.35□□□□□ -1.39
CCDC188H7C350 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AC090774.2-201ENST00000584708 322 ntBASIC6.35□□□□□ -1.39
CCDC188H7C350 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC188H7C350 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
CCDC188H7C350 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CCDC188H7C350 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCDC188H7C350 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC188H7C350 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC188H7C350 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.35□□□□□ -1.39
CCDC188H7C350 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC188H7C350 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC188H7C350 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC188H7C350 THAP12P9-201ENST00000503971 2360 ntBASIC6.35□□□□□ -1.39
CCDC188H7C350 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC188H7C350 AL592429.1-201ENST00000403909 1473 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC232271.1-201ENST00000602455 2715 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC188H7C350 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AL158152.1-201ENST00000602652 1435 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC233968.1-201ENST00000611212 1300 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 RNA5SP308-201ENST00000362532 115 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 U3.10-201ENST00000364459 214 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 RN7SKP117-201ENST00000410175 264 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 MYL6P5-201ENST00000412707 459 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 RPL21P50-201ENST00000417698 477 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AL691447.1-201ENST00000419456 387 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 SOCS5P1-201ENST00000440415 949 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC188H7C350 RBMY2EP-202ENST00000456360 940 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC188H7C350 CCDC11P1-201ENST00000503137 1162 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 NPM1P5-201ENST00000557228 838 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC093524.1-201ENST00000564266 1094 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AC091304.5-201ENST00000568969 158 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC008555.7-201ENST00000605008 583 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AL589743.6-201ENST00000611025 117 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 AP003108.4-201ENST00000623917 878 ntBASIC6.34□□□□□ -1.39
CCDC188H7C350 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC188H7C350 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC188H7C350 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC188H7C350 AC024587.1-201ENST00000505925 2157 ntBASIC6.34□□□□□ -1.4
CCDC188H7C350 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.34□□□□□ -1.4
CCDC188H7C350 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC188H7C350 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC188H7C350 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC188H7C350 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC188H7C350 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC188H7C350 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC188H7C350 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC188H7C350 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC188H7C350 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC188H7C350 RNA5SP429-201ENST00000363688 109 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 RN7SKP257-201ENST00000364525 309 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC188H7C350 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC188H7C350 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC188H7C350 RSU1P1-201ENST00000453416 441 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC188H7C350 Z83838.1-202ENST00000456225 839 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 RN7SL836P-201ENST00000476140 296 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 AC135999.1-201ENST00000478962 479 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 PDCL3P4-201ENST00000489621 720 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 OR4D12P-201ENST00000509361 911 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC188H7C350 AC097486.1-201ENST00000515331 210 ntBASIC6.33□□□□□ -1.4
CCDC188H7C350 AP001994.1-201ENST00000527539 826 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms