Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RN7SKP208-201ENST00000365474 361 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 XGY1-201ENST00000381172 446 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC003045.1-201ENST00000398779 713 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CIR1P3-201ENST00000405137 479 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL31P54-201ENST00000429803 370 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 FTH1P20-201ENST00000434913 548 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AL513318.1-201ENST00000437925 991 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL7P36-201ENST00000444633 681 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 VN1R10P-201ENST00000447106 875 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 OR7H1P-201ENST00000448965 922 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC098824.1-201ENST00000453565 980 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AMD1P1-201ENST00000457220 922 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 DYNLL1P6-201ENST00000503440 264 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 GAPDHP44-201ENST00000513513 1007 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC022483.1-201ENST00000514020 567 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 MRPL40P1-201ENST00000542687 604 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 GLYCAM1-201ENST00000546596 285 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC124947.2-202ENST00000552735 133 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC006960.3-201ENST00000561845 705 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 RN7SL49P-201ENST00000581392 298 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 C8orf59P2-201ENST00000603441 271 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC133552.5-201ENST00000604266 540 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC007497.1-201ENST00000610421 561 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AL135999.3-201ENST00000610501 812 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC097641.3-201ENST00000613523 464 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AL136967.1-201ENST00000625120 441 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 AL133320.1-201ENST00000621423 2352 ntBASIC7.73□□□□□ -1.17
PCDHGA11Q9Y5H2 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL137058.3-201ENST00000624531 3099 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 MTND4P12-201ENST00000498999 1377 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC087203.2-201ENST00000526502 1587 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 Y_RNA.256-201ENST00000364594 104 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AC093392.1-201ENST00000366280 340 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RNA5SP105-201ENST00000391123 113 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 CYCSP45-201ENST00000402289 315 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 COX6A1P3-201ENST00000404167 293 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 AL109918.1-202ENST00000406724 436 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 SNORD3J-201ENST00000408473 190 ntBASIC7.72□□□□□ -1.17
PCDHGA11Q9Y5H2 RN7SKP26-201ENST00000410247 293 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms