Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC114878.1-201ENST00000441166 358 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 COX4I1P2-201ENST00000447446 547 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 CCNHP1-201ENST00000513311 678 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 OR5D2P-201ENST00000524390 911 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC008055.1-201ENST00000547032 609 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC005632.2-201ENST00000564271 828 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 MTND4LP25-201ENST00000570218 163 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC015818.6-201ENST00000584274 634 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC022400.9-201ENST00000623633 273 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 CDY5P-201ENST00000411487 1580 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 CDY9P-201ENST00000451397 1580 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 SAMMSON-210ENST00000641260 1308 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 AKAP17BP-201ENST00000431706 2719 ntBASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SSX2IPQ9Y2D8 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 RPL11P4-201ENST00000332269 436 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 OR7E156P-201ENST00000400303 464 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 DHFRP5-201ENST00000406944 564 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC092865.3-201ENST00000425390 1026 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 EMC3-AS1-205ENST00000438698 534 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC009963.3-201ENST00000458090 486 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 MORF4L2P1-201ENST00000503761 858 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC090568.1-201ENST00000509499 856 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 SUMO2P19-201ENST00000518920 295 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AL136097.3-201ENST00000611097 505 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC104307.1-201ENST00000616142 196 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC073488.9-201ENST00000631601 754 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AL590396.2-201ENST00000636511 1041 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AL357140.4-201ENST00000636827 412 ntBASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.97□□□□□ -1.29
SSX2IPQ9Y2D8 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 AC114876.1-201ENST00000490962 1366 ntBASIC6.96□□□□□ -1.29
SSX2IPQ9Y2D8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms