Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VPS29Q9UBQ0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 EIF3EP1-201ENST00000433978 1316 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 RNU105B-201ENST00000364478 208 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 SNORA77.2-201ENST00000408571 112 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 RNA5SP156-201ENST00000410250 110 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 RN7SKP38-201ENST00000410782 309 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 RN7SKP166-201ENST00000410812 305 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 VN1R20P-201ENST00000425215 966 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 AC010086.1-201ENST00000437359 1052 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 AL162739.1-201ENST00000450606 307 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 H3F3AP5-201ENST00000475267 429 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 NACAP5-201ENST00000509863 636 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 RNA5SP434-201ENST00000516647 121 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 AL049779.3-201ENST00000557141 606 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 WBP1LP11-201ENST00000586141 328 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 NDUFB9P1-201ENST00000604683 510 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS29Q9UBQ0 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
VPS29Q9UBQ0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.84□□□□□ -1.48
VPS29Q9UBQ0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.84□□□□□ -1.48
VPS29Q9UBQ0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.84□□□□□ -1.48
VPS29Q9UBQ0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 OFD1P17-201ENST00000437639 3018 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RPS7P8-201ENST00000418311 581 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RPS15AP30-201ENST00000420976 390 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RPL7AP14-201ENST00000424041 802 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 RPL12P49-201ENST00000441100 121 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AL512593.1-201ENST00000444758 779 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 CEACAMP11-201ENST00000455211 583 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 CCDC11P1-201ENST00000503137 1162 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 HMGN1P16-201ENST00000508308 283 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 SNX18P25-201ENST00000510539 758 ntBASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.83□□□□□ -1.48
VPS29Q9UBQ0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms