Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 AC093283.1-201ENST00000565306 1075 ntBASIC5.71□□□□□ -1.5
CHD8Q9HCK8 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 EXOC7P1-201ENST00000509881 2059 ntBASIC5.71□□□□□ -1.5
CHD8Q9HCK8 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC5.71□□□□□ -1.5
CHD8Q9HCK8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 KCTD10P1-201ENST00000434203 625 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 MORF4-201ENST00000447135 971 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 RPL5P22-201ENST00000480199 884 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 KC877982.1-201ENST00000602313 470 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AL445528.2-201ENST00000620582 470 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 MELK-207ENST00000536860 2342 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AP000766.1-201ENST00000561746 4140 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 RNA5SP515-201ENST00000364570 118 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 USP9YP9-201ENST00000429406 715 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 RPS23P9-201ENST00000448848 438 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC126915.2-201ENST00000610957 190 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 ERG-205ENST00000398910 4954 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 AC112255.1-201ENST00000624070 2493 ntBASIC5.7□□□□□ -1.5
CHD8Q9HCK8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CHD8Q9HCK8 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 CYCSP12-201ENST00000437729 300 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC012512.1-201ENST00000446594 718 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 RPS3AP41-201ENST00000462701 778 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC100832.1-201ENST00000471945 383 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC109481.1-201ENST00000509173 282 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 RNU6-615P-201ENST00000516065 106 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC092865.1-201ENST00000544395 1023 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AC010333.3-201ENST00000615100 402 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHD8Q9HCK8 ZSWIM5P3-201ENST00000511265 2743 ntBASIC5.69□□□□□ -1.5
CHD8Q9HCK8 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms