Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC019257.2-201ENST00000605539 497 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AL121652.1-201ENST00000608851 448 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AL356863.1-201ENST00000623378 1080 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AL050305.1-201ENST00000399993 1230 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AL451061.1-201ENST00000407887 862 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 MTCO2P8-201ENST00000412213 658 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 SNRPEP5-201ENST00000425442 278 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC006326.1-201ENST00000445465 787 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 RPL23AP28-201ENST00000448062 470 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AP002345.1-201ENST00000456493 928 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 DUXAP8-207ENST00000456786 622 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 RPS16P9-201ENST00000477220 427 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AL135933.1-201ENST00000498657 802 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC021146.11-201ENST00000503319 491 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC083906.1-201ENST00000509298 406 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 SCARNA11.1-201ENST00000516918 132 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 RNA5SP278-201ENST00000517055 102 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 IGLC4-201ENST00000517690 248 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 BTG1P1-201ENST00000540396 508 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 MTND2P17-201ENST00000550281 688 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC233266.2-201ENST00000567067 528 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 WDR45BP1-201ENST00000583470 1029 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC011921.2-201ENST00000589465 152 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 BX323046.1-201ENST00000610145 535 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 DUXAP10-204ENST00000612052 616 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 PCA3_2.1-201ENST00000612507 409 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AL445528.2-201ENST00000620582 470 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 AC008626.2-201ENST00000624425 248 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 MIR665-201ENST00000635949 72 ntBASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
AMBRA1Q9C0C7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC007159.1-201ENST00000566529 4706 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC126474.2-201ENST00000623268 1750 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 AC067942.1-201ENST00000488045 1493 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 FUNDC2P3-201ENST00000334716 533 ntBASIC6.18□□□□□ -1.42
AMBRA1Q9C0C7 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms