Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC026898.1-201ENST00000586404 571 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC022164.1-201ENST00000568767 2673 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 AC024587.1-201ENST00000505925 2157 ntBASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
UPF3BQ9BZI7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 CCNT2P1-201ENST00000423082 1315 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 RPL11P4-201ENST00000332269 436 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 GPN3P1-201ENST00000423883 535 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 RPL12P16-201ENST00000431098 498 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 H3F3BP1-201ENST00000440551 403 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 RPL12P31-201ENST00000478433 450 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 OR4D12P-201ENST00000509361 911 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC009879.1-201ENST00000520029 839 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AP001858.2-201ENST00000536213 601 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC006512.2-201ENST00000543250 486 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AL845552.1-201ENST00000556820 323 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC063977.7-201ENST00000594454 337 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 RN7SL261P-201ENST00000613441 282 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC025262.3-201ENST00000623666 360 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AC111152.1-202ENST00000635848 339 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 MIR4302-201ENST00000638058 60 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 VN2R1P-201ENST00000449668 1743 ntBASIC7.38□□□□□ -1.23
UPF3BQ9BZI7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 RNA5SP346-201ENST00000363541 121 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 RN7SKP151-201ENST00000410230 316 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 MTND2P12-201ENST00000417560 1252 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 EMC3-AS1-205ENST00000438698 534 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 SOCS5P1-201ENST00000440415 949 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 CXCR2P1-202ENST00000443392 1074 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 OR2L9P-201ENST00000444456 913 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC106822.1-201ENST00000502647 526 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AP001804.1-201ENST00000526868 919 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 MIR4443-201ENST00000585052 53 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC020916.2-201ENST00000591242 360 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 AL137067.2-201ENST00000621202 131 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms