Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-CQ95604 FAM111A-211ENST00000533703 4202 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 RNA5SP448-201ENST00000363151 111 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 Y_RNA.142-201ENST00000363491 102 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 RNA5SP429-201ENST00000363688 109 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AC007066.1-201ENST00000392902 381 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 USP9YP27-201ENST00000418455 438 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-CQ95604 MTND2P23-201ENST00000422990 651 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC003071.2-201ENST00000423857 315 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AL589794.1-201ENST00000424971 390 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-CQ95604 OFD1P4Y-201ENST00000455273 1179 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC104849.1-201ENST00000462623 405 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC092757.1-201ENST00000467293 467 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC008620.1-201ENST00000468453 592 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 RN7SL836P-201ENST00000476140 296 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-CQ95604 HMGB1P29-201ENST00000505659 499 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 RGS5-219ENST00000528019 512 ntTSL 4 BASIC8.38□□□□□ -1.07
HLA-CQ95604 OR4C1P-201ENST00000530880 937 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AL512310.1-201ENST00000548639 172 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AL139286.1-201ENST00000604465 483 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AC068726.1-201ENST00000610993 341 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AP004607.9-201ENST00000618202 316 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 AC007342.8-201ENST00000623278 678 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-CQ95604 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.38□□□□□ -1.07
HLA-CQ95604 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.38□□□□□ -1.07
HLA-CQ95604 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.38□□□□□ -1.07
HLA-CQ95604 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-CQ95604 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-CQ95604 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-CQ95604 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC8.38□□□□□ -1.07
HLA-CQ95604 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-CQ95604 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
HLA-CQ95604 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
HLA-CQ95604 EIF4BP5-201ENST00000567338 1795 ntBASIC8.38□□□□□ -1.07
HLA-CQ95604 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HLA-CQ95604 CD302-204ENST00000553424 3866 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-CQ95604 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-CQ95604 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 RNU5F-6P-201ENST00000362979 116 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 RN7SKP50-201ENST00000364694 315 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.37□□□□□ -1.07
HLA-CQ95604 SNORA11D-201ENST00000408548 128 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 SNORA11E-201ENST00000408778 128 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-CQ95604 RPL5P6-201ENST00000425640 886 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 SEPT7P5-201ENST00000434048 306 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AL356121.1-201ENST00000442911 156 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-CQ95604 RPLP0P1-201ENST00000457002 361 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AK6P1-201ENST00000540219 478 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.37□□□□□ -1.07
HLA-CQ95604 CHCHD3P2-201ENST00000550751 639 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AC092868.1-201ENST00000557949 802 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 AL050343.2-201ENST00000607338 280 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 RN7SL536P-201ENST00000612366 290 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 RN7SL545P-201ENST00000620547 290 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 RN7SL759P-201ENST00000620768 290 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AC138305.3-201ENST00000624988 240 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 CLUHP10-201ENST00000631979 980 ntBASIC8.37□□□□□ -1.07
HLA-CQ95604 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC8.37□□□□□ -1.07
HLA-CQ95604 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
HLA-CQ95604 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms