Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC106730.3-201ENST00000624568 641 ntBASIC7.73□□□□□ -1.17
SYNE4Q8N205 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE4Q8N205 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNE4Q8N205 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNE4Q8N205 AP002364.1-201ENST00000623330 3386 ntBASIC7.73□□□□□ -1.17
SYNE4Q8N205 CTAGE11P-201ENST00000451540 2353 ntBASIC7.73□□□□□ -1.17
SYNE4Q8N205 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 SNORA43.1-201ENST00000364863 140 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AL050335.1-201ENST00000396909 869 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 MIR937-201ENST00000401271 86 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 RNA5SP156-201ENST00000410250 110 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 RPL35AP31-201ENST00000418340 337 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AL512593.1-201ENST00000444758 779 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC005077.1-201ENST00000449226 375 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 MYO5BP2-201ENST00000449815 1277 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AP006222.1-205ENST00000450734 457 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 RPS27AP2-201ENST00000457576 465 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC112191.2-201ENST00000522428 333 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC084033.1-201ENST00000550830 633 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 RNU4ATAC-201ENST00000580972 127 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC139493.1-201ENST00000604368 397 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC097467.4-201ENST00000605504 141 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AL021707.7-201ENST00000607991 416 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 AL445649.1-201ENST00000615941 691 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC010480.1-201ENST00000624823 684 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 AC011815.2-201ENST00000618230 2021 ntBASIC7.72□□□□□ -1.17
SYNE4Q8N205 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SYNE4Q8N205 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SYNE4Q8N205 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.71□□□□□ -1.17
SYNE4Q8N205 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.71□□□□□ -1.17
SYNE4Q8N205 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.71□□□□□ -1.17
SYNE4Q8N205 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE4Q8N205 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE4Q8N205 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SYNE4Q8N205 AC105749.1-201ENST00000631338 2008 ntBASIC7.71□□□□□ -1.17
SYNE4Q8N205 AC123769.2-201ENST00000624332 5984 ntBASIC7.71□□□□□ -1.17
SYNE4Q8N205 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL096829.1-201ENST00000413677 457 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL513325.1-201ENST00000417716 1034 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL121776.1-201ENST00000429337 372 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 GAPDHP75-201ENST00000433910 943 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 RPSAP39-201ENST00000467439 883 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 TMEM97P2-201ENST00000517841 403 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC092451.2-201ENST00000538746 658 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 SNRPGP1-201ENST00000553864 222 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC090079.2-201ENST00000575289 768 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AP005901.4-201ENST00000577336 569 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC013731.1-201ENST00000604340 883 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC007620.3-201ENST00000608131 497 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 RNA5SP440-201ENST00000612665 119 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AL445647.2-201ENST00000615170 130 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 AC073592.7-201ENST00000623659 507 ntBASIC7.71□□□□□ -1.18
SYNE4Q8N205 MAPK10-323ENST00000641493 3207 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms