Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC006511.3-201ENST00000624929 1783 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 CXADRP1-201ENST00000398098 1095 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AP002884.1-201ENST00000479691 655 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 BCAS2P1-201ENST00000528022 632 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 OR4A40P-201ENST00000533878 948 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC092681.3-201ENST00000609463 678 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC004801.6-201ENST00000616571 978 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 CXADRP3-202ENST00000617265 1100 ntBASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
C9orf40Q8IXQ3 AC009779.8-201ENST00000641684 4384 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AC007159.1-201ENST00000566529 4706 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL359091.1-201ENST00000449048 1734 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 SNORA51.9-201ENST00000384295 124 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AP003170.5-201ENST00000397185 335 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL132875.1-201ENST00000403623 949 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 RPS7P8-201ENST00000418311 581 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 SUMO2P8-201ENST00000434672 286 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL512593.1-201ENST00000444758 779 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 OR52E7P-201ENST00000452394 933 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 Z83838.1-202ENST00000456225 839 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL022319.1-201ENST00000458183 1167 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 RPL17P2-201ENST00000491913 451 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL158068.1-201ENST00000506116 616 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 OR6M2P-201ENST00000529831 871 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AC103968.1-201ENST00000557841 573 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AC020916.2-201ENST00000591242 360 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AC068768.2-201ENST00000602352 343 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AC141002.1-201ENST00000607025 279 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 HSPD1P9-201ENST00000420325 1636 ntBASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.69□□□□□ -1.5
C9orf40Q8IXQ3 AL353763.1-201ENST00000624467 1628 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms