Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC130360.1-201ENST00000425489 1117 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AL354707.3-201ENST00000427308 331 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC023274.2-201ENST00000445264 521 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AC002553.3-201ENST00000453002 341 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 OR7E99P-201ENST00000505750 922 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
FOXF1Q12946 RNA5SP434-201ENST00000516647 121 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC130365.2-201ENST00000525882 1201 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 OR6M2P-201ENST00000529831 871 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC090115.2-201ENST00000548060 883 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
FOXF1Q12946 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC141002.1-201ENST00000607025 279 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 RN7SL261P-201ENST00000613441 282 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AL138960.1-201ENST00000613838 513 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 FAM27E2-201ENST00000619668 403 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXF1Q12946 CASC19-274ENST00000642018 970 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 AL731532.1-201ENST00000623972 4236 ntBASIC5.56□□□□□ -1.52
FOXF1Q12946 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
FOXF1Q12946 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
FOXF1Q12946 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
FOXF1Q12946 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXF1Q12946 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
FOXF1Q12946 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC022325.1-201ENST00000502748 2199 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 SNORA21-201ENST00000362423 132 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 RNU1-65P-201ENST00000363919 148 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 SNORA70.9-201ENST00000384370 135 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 RPL23AP18-201ENST00000416139 468 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC023141.3-201ENST00000436698 278 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 RPL5P7-201ENST00000444235 813 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC093166.3-201ENST00000448785 303 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXF1Q12946 OR52I1-201ENST00000450052 1050 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 PPIAP7-201ENST00000454070 489 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC118758.1-202ENST00000454719 225 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 AC091874.2-201ENST00000505889 720 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 CR383658.1-201ENST00000514609 734 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXF1Q12946 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 AP000620.1-201ENST00000527147 504 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC002519.2-203ENST00000567043 837 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 RN7SL371P-201ENST00000578099 267 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 AC092681.3-201ENST00000609463 678 ntBASIC5.55□□□□□ -1.52
FOXF1Q12946 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
FOXF1Q12946 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
FOXF1Q12946 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXF1Q12946 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXF1Q12946 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXF1Q12946 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
FOXF1Q12946 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXF1Q12946 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms