Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 CDY11P-201ENST00000447168 1651 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 NR1H5P-201ENST00000452683 1377 ntBASIC5.35□□□□□ -1.55
ACTBP60709 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ACTBP60709 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ACTBP60709 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ACTBP60709 RNA5SP382-201ENST00000363355 112 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 ZNF37CP-201ENST00000406795 241 ntBASIC5.35□□□□□ -1.55
ACTBP60709 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.35□□□□□ -1.55
ACTBP60709 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 MRPS21P2-201ENST00000424704 264 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 AL731534.1-201ENST00000434711 269 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AC073410.1-201ENST00000435125 589 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 BMS1P11-201ENST00000442351 885 ntBASIC5.35□□□□□ -1.55
ACTBP60709 UBBP5-201ENST00000446970 266 ntBASIC5.35□□□□□ -1.55
ACTBP60709 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 OSTCP1-201ENST00000455507 450 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AC112187.1-201ENST00000455837 479 ntBASIC5.35□□□□□ -1.55
ACTBP60709 BMS1P9-201ENST00000457640 885 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AL079303.1-201ENST00000486611 463 ntBASIC5.35□□□□□ -1.55
ACTBP60709 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 RN7SL37P-201ENST00000490461 307 ntBASIC5.35□□□□□ -1.55
ACTBP60709 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ACTBP60709 AC137549.1-201ENST00000514243 533 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AC020937.1-201ENST00000519677 1013 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 AP002004.1-206ENST00000532441 876 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 AC007068.2-201ENST00000543168 395 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 NPM1P5-201ENST00000557228 838 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.35□□□□□ -1.55
ACTBP60709 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.35□□□□□ -1.55
ACTBP60709 MIR132-201ENST00000591554 101 ntBASIC5.35□□□□□ -1.55
ACTBP60709 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 AL137000.1-201ENST00000610528 1244 ntBASIC5.35□□□□□ -1.55
ACTBP60709 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.35□□□□□ -1.55
ACTBP60709 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.35□□□□□ -1.55
ACTBP60709 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.35□□□□□ -1.55
ACTBP60709 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ACTBP60709 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.34□□□□□ -1.55
ACTBP60709 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 HDAC1P2-201ENST00000453661 1398 ntBASIC5.34□□□□□ -1.55
ACTBP60709 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 RN7SKP191-201ENST00000364713 306 ntBASIC5.34□□□□□ -1.55
ACTBP60709 RNA5SP279-201ENST00000365513 117 ntBASIC5.34□□□□□ -1.55
ACTBP60709 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 AL445213.1-201ENST00000412589 747 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTBP60709 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 GAPDHP33-201ENST00000443168 1013 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTBP60709 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 RAB28P2-201ENST00000454299 641 ntBASIC5.34□□□□□ -1.55
ACTBP60709 RN7SKP198-201ENST00000459286 306 ntBASIC5.34□□□□□ -1.55
ACTBP60709 RN7SL372P-201ENST00000461982 298 ntBASIC5.34□□□□□ -1.55
ACTBP60709 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTBP60709 RPS7P11-201ENST00000484240 586 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTBP60709 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.34□□□□□ -1.55
ACTBP60709 AC010343.2-201ENST00000510162 224 ntBASIC5.34□□□□□ -1.55
ACTBP60709 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AC136777.2-201ENST00000522979 358 ntBASIC5.34□□□□□ -1.55
ACTBP60709 OR6M2P-201ENST00000529831 871 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AL049779.3-201ENST00000557141 606 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms