Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RPL7L1P3-201ENST00000455249 689 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 RN7SL254P-201ENST00000460609 284 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 AC073594.1-201ENST00000462065 364 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 AP002453.1-201ENST00000492327 668 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCLP35914 AC018797.1-201ENST00000510791 255 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 RN7SKP183-201ENST00000517169 324 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCLP35914 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.17□□□□□ -1.42
HMGCLP35914 AC022106.1-201ENST00000612834 766 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 MIR6721-201ENST00000617181 87 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 AL137067.2-201ENST00000621202 131 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 CASC19-274ENST00000642018 970 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGCLP35914 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCLP35914 AC139426.3-201ENST00000605648 2059 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 AC018717.1-201ENST00000457712 1505 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCLP35914 RN7SKP237-201ENST00000364663 301 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HMGCLP35914 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 SEPT7P2-202ENST00000398921 823 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGCLP35914 HMGB1P7-201ENST00000450921 612 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.16□□□□□ -1.42
HMGCLP35914 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.16□□□□□ -1.42
HMGCLP35914 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.16□□□□□ -1.42
HMGCLP35914 AC073389.3-201ENST00000609434 935 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.16□□□□□ -1.42
HMGCLP35914 EIF3EP1-201ENST00000433978 1316 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 AC090220.1-201ENST00000593078 1699 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HMGCLP35914 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 AL049634.1-201ENST00000453770 1720 ntBASIC6.16□□□□□ -1.42
HMGCLP35914 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMGCLP35914 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.16□□□□□ -1.42
HMGCLP35914 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HMGCLP35914 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGCLP35914 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
HMGCLP35914 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGCLP35914 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMGCLP35914 AC006600.2-201ENST00000624834 2506 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 SNORA21-201ENST00000362423 132 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 RNA5SP279-201ENST00000365513 117 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCLP35914 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCLP35914 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMGCLP35914 AC130360.1-201ENST00000425489 1117 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 PSMD10P2-201ENST00000432890 672 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCLP35914 RPL5P7-201ENST00000444235 813 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 EEF1B2P3-201ENST00000447718 678 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC093166.3-201ENST00000448785 303 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 RPL23AP60-201ENST00000450011 454 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 MARK2P8-201ENST00000476069 952 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCLP35914 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCLP35914 MAST4-IT1-201ENST00000514241 658 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 CYP4F27P-201ENST00000514557 494 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC130365.2-201ENST00000525882 1201 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCLP35914 AC090651.1-201ENST00000567865 634 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.15□□□□□ -1.42
HMGCLP35914 AC020916.2-201ENST00000591242 360 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC141002.1-201ENST00000607025 279 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC009779.8-202ENST00000607990 932 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
HMGCLP35914 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 AC018659.2-201ENST00000624690 715 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.15□□□□□ -1.42
HMGCLP35914 AC073488.6-201ENST00000632293 754 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.15□□□□□ -1.42
HMGCLP35914 AL596275.2-207ENST00000641188 675 ntBASIC6.15□□□□□ -1.42
HMGCLP35914 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
HMGCLP35914 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms