Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC110056.1-201ENST00000525759 911 ntBASIC8.83□□□□□ -1
PTPRMP28827 AC092865.1-201ENST00000544395 1023 ntBASIC8.83□□□□□ -1
PTPRMP28827 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 AC011840.5-201ENST00000582125 771 ntBASIC8.83□□□□□ -1
PTPRMP28827 AC027229.1-201ENST00000583887 253 ntBASIC8.83□□□□□ -1
PTPRMP28827 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.83□□□□□ -1
PTPRMP28827 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 FO393409.1-201ENST00000399325 1372 ntBASIC8.83□□□□□ -1
PTPRMP28827 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.83□□□□□ -1
PTPRMP28827 AC022905.1-201ENST00000503430 3048 ntBASIC8.83□□□□□ -1
PTPRMP28827 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.83□□□□□ -1
PTPRMP28827 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PTPRMP28827 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC8.83□□□□□ -1
PTPRMP28827 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC8.83□□□□□ -1
PTPRMP28827 MRPL53P1-201ENST00000414323 319 ntBASIC8.83□□□□□ -1
PTPRMP28827 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.83□□□□□ -1
PTPRMP28827 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.83□□□□□ -1
PTPRMP28827 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.83□□□□□ -1
PTPRMP28827 AL049779.2-201ENST00000553847 315 ntBASIC8.83□□□□□ -1
PTPRMP28827 AC015720.2-201ENST00000567709 334 ntBASIC8.83□□□□□ -1
PTPRMP28827 AC015818.6-201ENST00000584274 634 ntBASIC8.83□□□□□ -1
PTPRMP28827 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.83□□□□□ -1
PTPRMP28827 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
PTPRMP28827 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.82□□□□□ -1
PTPRMP28827 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
PTPRMP28827 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.82□□□□□ -1
PTPRMP28827 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.82□□□□□ -1
PTPRMP28827 AL022331.1-201ENST00000429025 477 ntBASIC8.82□□□□□ -1
PTPRMP28827 RPL7L1P9-201ENST00000431298 745 ntBASIC8.82□□□□□ -1
PTPRMP28827 AC092967.1-201ENST00000449016 481 ntBASIC8.82□□□□□ -1
PTPRMP28827 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
PTPRMP28827 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 AC092824.1-201ENST00000483524 576 ntBASIC8.82□□□□□ -1
PTPRMP28827 AC083982.1-201ENST00000485679 344 ntBASIC8.82□□□□□ -1
PTPRMP28827 AC114728.1-201ENST00000488289 483 ntBASIC8.82□□□□□ -1
PTPRMP28827 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.82□□□□□ -1
PTPRMP28827 AC095057.1-201ENST00000507583 168 ntBASIC8.82□□□□□ -1
PTPRMP28827 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.82□□□□□ -1
PTPRMP28827 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.82□□□□□ -1
PTPRMP28827 IGLV3-30-201ENST00000524362 298 ntBASIC8.82□□□□□ -1
PTPRMP28827 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC8.82□□□□□ -1
PTPRMP28827 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.82□□□□□ -1
PTPRMP28827 AC009120.2-204ENST00000621548 2032 ntBASIC8.82□□□□□ -1
PTPRMP28827 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PTPRMP28827 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
PTPRMP28827 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.81□□□□□ -1
PTPRMP28827 AC005839.1-201ENST00000624148 3213 ntBASIC8.81□□□□□ -1
PTPRMP28827 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 AC010132.2-201ENST00000295493 1043 ntBASIC8.81□□□□□ -1
PTPRMP28827 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.81□□□□□ -1
PTPRMP28827 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.81□□□□□ -1
PTPRMP28827 GABARAPL3-201ENST00000412799 354 ntBASIC8.81□□□□□ -1
PTPRMP28827 AC113412.1-201ENST00000425840 504 ntBASIC8.81□□□□□ -1
PTPRMP28827 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.81□□□□□ -1
PTPRMP28827 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.81□□□□□ -1
PTPRMP28827 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.81□□□□□ -1
PTPRMP28827 AC005297.1-201ENST00000444765 862 ntBASIC8.81□□□□□ -1
PTPRMP28827 AL136981.1-203ENST00000451452 3844 ntBASIC8.81□□□□□ -1
PTPRMP28827 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.81□□□□□ -1
PTPRMP28827 AC021146.10-201ENST00000515628 706 ntBASIC8.81□□□□□ -1
PTPRMP28827 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.81□□□□□ -1
PTPRMP28827 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC8.81□□□□□ -1
PTPRMP28827 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.81□□□□□ -1
PTPRMP28827 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.81□□□□□ -1
PTPRMP28827 SNORD91A-202ENST00000609620 191 ntBASIC8.81□□□□□ -1
PTPRMP28827 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.81□□□□□ -1
PTPRMP28827 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.81□□□□□ -1
PTPRMP28827 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
PTPRMP28827 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms