Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL8A2P25067 OR11H13P-201ENST00000359695 979 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.21□□□□□ -1.58
COL8A2P25067 CYP4F30P-202ENST00000420048 405 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 OR3D1P-201ENST00000438288 955 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.21□□□□□ -1.58
COL8A2P25067 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC094085.1-201ENST00000468914 584 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.21□□□□□ -1.58
COL8A2P25067 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 RNA5SP340-201ENST00000517132 107 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 TRIM77BP-201ENST00000524985 1119 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.21□□□□□ -1.58
COL8A2P25067 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.21□□□□□ -1.58
COL8A2P25067 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC233702.7-202ENST00000582941 211 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.21□□□□□ -1.58
COL8A2P25067 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 AC068768.2-201ENST00000602352 343 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 AL445649.1-201ENST00000615941 691 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 AP001962.1-201ENST00000624114 559 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 AC073488.3-201ENST00000631611 778 ntBASIC5.21□□□□□ -1.58
COL8A2P25067 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.21□□□□□ -1.58
COL8A2P25067 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
COL8A2P25067 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
COL8A2P25067 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.21□□□□□ -1.58
COL8A2P25067 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL8A2P25067 AC024651.2-201ENST00000562480 2098 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 PSG10P-201ENST00000501199 1500 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 SNORA43.1-201ENST00000364863 140 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AL132875.1-201ENST00000403623 949 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 RPL35AP31-201ENST00000418340 337 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 AC066692.1-201ENST00000421721 457 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AC016908.1-201ENST00000442571 1219 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 CT45A11P-201ENST00000448043 1134 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.2□□□□□ -1.58
COL8A2P25067 FTH1P8-201ENST00000498161 514 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.2□□□□□ -1.58
COL8A2P25067 RNA5SP434-201ENST00000516647 121 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 AC073581.1-201ENST00000519036 575 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 IGHV1-14-201ENST00000523391 241 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 TRIM51DP-201ENST00000529746 596 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AP004609.2-201ENST00000532177 190 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.2□□□□□ -1.58
COL8A2P25067 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.2□□□□□ -1.58
COL8A2P25067 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.2□□□□□ -1.58
COL8A2P25067 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 AC024884.1-201ENST00000620583 399 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 OR7A1P-202ENST00000641542 1158 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AP001541.1-201ENST00000623322 1904 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.2□□□□□ -1.58
COL8A2P25067 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.2□□□□□ -1.58
COL8A2P25067 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL8A2P25067 AC011416.1-201ENST00000514947 1732 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 AL731556.1-201ENST00000394628 3711 ntBASIC5.2□□□□□ -1.58
COL8A2P25067 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms