Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RN7SL273P-201ENST00000481561 299 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGA1P17096 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 OR56A7P-201ENST00000524865 941 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 PCNAP4-201ENST00000532690 730 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AC135626.1-201ENST00000556983 435 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AL356801.1-201ENST00000559320 294 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.31□□□□□ -1.4
HMGA1P17096 MIR4301-201ENST00000577203 66 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AC067852.5-201ENST00000589299 310 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AC119403.2-201ENST00000590960 598 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.31□□□□□ -1.4
HMGA1P17096 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.31□□□□□ -1.4
HMGA1P17096 RPL12P48-201ENST00000605620 304 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 AC127024.6-201ENST00000621598 424 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 SNORA17.5-201ENST00000630429 132 ntBASIC6.31□□□□□ -1.4
HMGA1P17096 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.31□□□□□ -1.4
HMGA1P17096 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HMGA1P17096 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HMGA1P17096 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HMGA1P17096 AC112243.1-201ENST00000623949 3851 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 SELENOWP1-201ENST00000322792 252 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGA1P17096 PTCD2P2-201ENST00000415579 1095 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 CHEK2P5-201ENST00000423877 246 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGA1P17096 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGA1P17096 TUBB4BP6-201ENST00000437576 479 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGA1P17096 AL355355.1-201ENST00000442900 793 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGA1P17096 NXT1P1-201ENST00000458481 316 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGA1P17096 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGA1P17096 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGA1P17096 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.3□□□□□ -1.4
HMGA1P17096 ZNF322P1-201ENST00000568013 1209 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 COX6CP7-201ENST00000597056 208 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGA1P17096 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGA1P17096 AC116667.2-201ENST00000641075 823 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 PABPC1P8-201ENST00000452851 2086 ntBASIC6.3□□□□□ -1.4
HMGA1P17096 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HMGA1P17096 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.3□□□□□ -1.4
HMGA1P17096 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.3□□□□□ -1.4
HMGA1P17096 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
HMGA1P17096 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGA1P17096 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 CCNT2P1-201ENST00000423082 1315 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
HMGA1P17096 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGA1P17096 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGA1P17096 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGA1P17096 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGA1P17096 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.29□□□□□ -1.4
HMGA1P17096 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGA1P17096 RN7SKP128-201ENST00000364270 303 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 RNA5SP500-201ENST00000364486 119 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGA1P17096 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HMGA1P17096 SNRPEP6-201ENST00000407465 277 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 AC245060.4-201ENST00000413293 1121 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGA1P17096 AC112187.1-201ENST00000455837 479 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 RN7SL165P-201ENST00000477476 291 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 AC083795.1-201ENST00000491760 320 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGA1P17096 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.29□□□□□ -1.4
HMGA1P17096 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HMGA1P17096 AC006530.1-201ENST00000555980 571 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 OR4H6P-201ENST00000563771 921 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 AL021918.2-201ENST00000613415 194 ntBASIC6.29□□□□□ -1.4
HMGA1P17096 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HMGA1P17096 AL357153.4-201ENST00000620487 1016 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms