Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 ZNF33BP1-201ENST00000452497 1834 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 MAPK10-261ENST00000641050 3109 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 RN7SKP93-201ENST00000363838 309 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 MIR649-201ENST00000384843 97 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AL136226.1-201ENST00000401715 802 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 FGF7P8-201ENST00000402994 292 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AL023807.1-201ENST00000407932 359 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 SRP68P3-201ENST00000416871 344 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 UGT1A13P-201ENST00000424780 762 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 FDPSP1-201ENST00000424976 1071 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 PSAT1P3-201ENST00000439132 1111 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 CFL1P4-201ENST00000451536 498 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 Z82190.1-201ENST00000454534 490 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 DMKN-219ENST00000461300 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 DMKN-239ENST00000474928 577 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC104563.1-201ENST00000476147 376 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 DMKN-253ENST00000488892 414 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 RN7SL737P-201ENST00000490246 282 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC091180.2-203ENST00000507337 601 ntTSL 4 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC091839.1-201ENST00000513087 269 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 OR5AP1P-201ENST00000529730 940 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC127029.1-201ENST00000560822 237 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 IGHV1OR16-1-201ENST00000568055 392 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC025518.2-201ENST00000605229 492 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC000041.2-201ENST00000619824 151 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 Metazoa_SRP.190-201ENST00000620330 287 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AL355480.3-201ENST00000630128 96 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC135068.10-201ENST00000638015 913 ntBASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC106774.9-201ENST00000638668 597 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC233724.17-201ENST00000639073 597 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 AC106774.8-201ENST00000639081 597 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 PKD2L2-201ENST00000290431 2202 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
RTN4Q9NQC3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC10.15□□□□□ -0.79
RTN4Q9NQC3 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
RTN4Q9NQC3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
RTN4Q9NQC3 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
RTN4Q9NQC3 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 ZNF644-202ENST00000347275 2036 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 SND1-IT1-201ENST00000623342 2481 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 KYNUP3-201ENST00000574386 1341 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 SNORA64.2-201ENST00000362696 132 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 RNA5SP298-201ENST00000364991 111 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 AL590133.1-201ENST00000412838 368 ntTSL 3 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 AC245452.3-201ENST00000413294 162 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 MTCYBP24-201ENST00000420387 1106 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 TPI1P1-201ENST00000420977 750 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 GAPDHP51-201ENST00000426454 1000 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 AC005006.1-201ENST00000432130 249 ntTSL 3 BASIC10.14□□□□□ -0.79
RTN4Q9NQC3 RPS3AP54-201ENST00000435535 734 ntBASIC10.14□□□□□ -0.79
RTN4Q9NQC3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms