Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AL390877.1-201ENST00000605704 214 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.49□□□□□ -1.53
SSX3Q99909 AL356608.1-201ENST00000610034 820 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 MIR6885-201ENST00000612241 66 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 PPBPP2-201ENST00000513150 1362 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 MAPK10-379ENST00000642013 1385 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 ZNF806-201ENST00000438300 1774 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 DDX43P1-201ENST00000510713 1763 ntBASIC5.49□□□□□ -1.53
SSX3Q99909 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.49□□□□□ -1.53
SSX3Q99909 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SSX3Q99909 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SSX3Q99909 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 AC010132.4-201ENST00000569883 1368 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 MTCO1P22-201ENST00000604619 1360 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SSX3Q99909 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SSX3Q99909 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 SNORD94-201ENST00000386037 137 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 RNA5SP474-201ENST00000391234 90 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AC026310.1-201ENST00000396004 378 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AL451046.1-201ENST00000406097 534 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 RAB9AP4-201ENST00000415230 609 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 AL596268.1-201ENST00000427910 1048 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 PAICSP2-201ENST00000429118 1150 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 RPS10P21-201ENST00000430654 475 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AL590128.1-201ENST00000433407 286 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 AC064862.5-201ENST00000440618 334 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 GAPDHP20-201ENST00000444107 1007 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 AL445991.1-201ENST00000450381 475 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 KF459542.1-201ENST00000450908 553 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 RBMY2TP-201ENST00000451162 947 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 FCF1P7-201ENST00000451185 558 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 MTCYBP14-201ENST00000457471 715 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AC083806.1-201ENST00000468934 316 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 HMGB3P14-201ENST00000494195 599 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 RN7SKP34-201ENST00000516142 244 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 AL590032.1-201ENST00000604920 252 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 OR1N1-202ENST00000619659 939 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 MIR6503-201ENST00000622884 86 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 AC005514.1-201ENST00000623521 208 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.48□□□□□ -1.53
SSX3Q99909 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SSX3Q99909 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.48□□□□□ -1.53
SSX3Q99909 AP005139.1-201ENST00000580702 1647 ntBASIC5.48□□□□□ -1.53
SSX3Q99909 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.48□□□□□ -1.53
SSX3Q99909 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SSX3Q99909 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms