Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNA5SP35-201ENST00000391257 129 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 RPL23AP17-201ENST00000401064 499 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 RPL12P23-201ENST00000405880 490 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 RPS26P38-201ENST00000414476 348 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 PRUNEP1-201ENST00000425846 705 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AL596268.1-201ENST00000427910 1048 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AL356390.1-201ENST00000455684 397 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AL355032.1-201ENST00000472981 438 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 MTND3P6-201ENST00000485242 339 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC096661.1-201ENST00000515870 822 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AP001994.1-201ENST00000527539 826 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 MIR3189-201ENST00000578735 73 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AC018558.4-201ENST00000622153 281 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
VPS33AQ96AX1 CAP1P2-201ENST00000417455 1409 ntBASIC6.07□□□□□ -1.44
VPS33AQ96AX1 AL121768.1-201ENST00000613917 2544 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 RNU11-201ENST00000387069 134 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL391419.1-201ENST00000398901 1275 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL451061.1-201ENST00000407887 862 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 RANP6-201ENST00000413691 644 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AHCYP8-201ENST00000425108 209 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 CCNJP1-201ENST00000450600 1149 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 OR52A4P-203ENST00000498233 1014 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 COX6B1P4-201ENST00000519826 484 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC026956.1-201ENST00000558741 396 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL360012.1-201ENST00000602813 131 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL121985.3-201ENST00000620690 523 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC006453.3-201ENST00000635891 377 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC232271.1-201ENST00000602455 2715 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC119674.1-202ENST00000641333 1860 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 NLRP3P1-201ENST00000622303 1785 ntBASIC6.06□□□□□ -1.44
VPS33AQ96AX1 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS33AQ96AX1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 WDR95P-201ENST00000425638 1542 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 AC092692.1-201ENST00000623625 2595 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS33AQ96AX1 OR56A4-201ENST00000330728 1209 ntBASIC6.05□□□□□ -1.44
VPS33AQ96AX1 RNA5SP382-201ENST00000363355 112 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms