Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 ARMC4P1-201ENST00000438905 707 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AL355355.1-201ENST00000442900 793 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 OR9A1P-202ENST00000484361 945 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC233702.7-202ENST00000582941 211 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC026898.1-201ENST00000586404 571 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC005332.4-201ENST00000592752 579 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC011891.2-201ENST00000604949 397 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 AL109924.4-201ENST00000623089 670 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC099654.15-201ENST00000639802 509 ntBASIC5.58□□□□□ -1.52
SKA3Q8IX90 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SKA3Q8IX90 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SKA3Q8IX90 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SKA3Q8IX90 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SKA3Q8IX90 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SKA3Q8IX90 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.58□□□□□ -1.52
SKA3Q8IX90 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 MTND5P12-201ENST00000502851 1449 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 RPS2P45-201ENST00000469997 2057 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 RNA5SP77-201ENST00000365394 120 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 YWHAZP4-201ENST00000392459 708 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 DHFRP2-201ENST00000414224 547 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 RPL21P50-201ENST00000417698 477 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC009506.2-201ENST00000420635 840 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 OR2L9P-201ENST00000444456 913 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC117500.1-201ENST00000497352 755 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 BTG1P1-201ENST00000540396 508 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 WBP1LP11-201ENST00000586141 328 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AL589863.1-201ENST00000595383 631 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 NDUFB9P1-201ENST00000604683 510 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.57□□□□□ -1.52
SKA3Q8IX90 AC093388.1-201ENST00000609166 430 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AL445649.1-201ENST00000615941 691 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AL122023.1-201ENST00000622847 530 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 AP000550.3-201ENST00000637734 379 ntBASIC5.57□□□□□ -1.52
SKA3Q8IX90 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SKA3Q8IX90 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.56□□□□□ -1.52
SKA3Q8IX90 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SKA3Q8IX90 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SKA3Q8IX90 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
SKA3Q8IX90 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SKA3Q8IX90 PRELID1P1-201ENST00000403549 660 ntBASIC5.56□□□□□ -1.52
SKA3Q8IX90 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SKA3Q8IX90 UBE2V1P14-201ENST00000415815 558 ntBASIC5.56□□□□□ -1.52
SKA3Q8IX90 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.56□□□□□ -1.52
SKA3Q8IX90 AC002127.1-201ENST00000421305 225 ntBASIC5.56□□□□□ -1.52
SKA3Q8IX90 FAM183DP-201ENST00000421987 399 ntBASIC5.56□□□□□ -1.52
SKA3Q8IX90 RPL5P2-201ENST00000429598 854 ntBASIC5.56□□□□□ -1.52
SKA3Q8IX90 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms