Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.96□□□□□ -1.29
HERC6Q8IVU3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HERC6Q8IVU3 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
HERC6Q8IVU3 AP000866.6-201ENST00000638898 3579 ntBASIC6.96□□□□□ -1.29
HERC6Q8IVU3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AL049697.3-201ENST00000406493 982 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 BMS1P13-201ENST00000417301 885 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC245452.2-201ENST00000435222 392 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 BMS1P10-201ENST00000443754 1120 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AL161636.2-201ENST00000445179 927 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 MTCYBP14-201ENST00000457471 715 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 RN7SL643P-201ENST00000471845 291 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 RN7SKP238-201ENST00000516483 249 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC009303.3-201ENST00000591103 736 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC092944.2-201ENST00000605443 889 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC010998.3-201ENST00000613871 631 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC126175.1-201ENST00000617041 758 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AP005139.1-201ENST00000580702 1647 ntBASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HERC6Q8IVU3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 CASC19-238ENST00000641523 1558 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 RNA5SP110-201ENST00000362638 115 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 MTND4LP21-201ENST00000415303 295 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 Z93019.1-201ENST00000416450 973 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC091390.2-201ENST00000432573 374 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 CLUHP1-201ENST00000435012 1190 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 VPS25P1-201ENST00000455691 508 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC068305.2-201ENST00000550567 1205 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC004232.1-201ENST00000571388 208 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AL049840.6-201ENST00000604583 345 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 BNIP3P7-201ENST00000605641 516 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AL596275.2-208ENST00000641192 594 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 OR7E91P-202ENST00000642062 1198 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AL353743.3-201ENST00000442109 1468 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 AC018717.1-201ENST00000457712 1505 ntBASIC6.95□□□□□ -1.3
HERC6Q8IVU3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HERC6Q8IVU3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.94□□□□□ -1.3
HERC6Q8IVU3 RNA5SP477-201ENST00000362639 119 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms