Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
LRRC28Q86X40 AC068726.1-201ENST00000610993 341 ntBASIC5.55□□□□□ -1.52
LRRC28Q86X40 AL591135.1-201ENST00000401578 5914 ntBASIC5.55□□□□□ -1.52
LRRC28Q86X40 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC28Q86X40 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC28Q86X40 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.55□□□□□ -1.52
LRRC28Q86X40 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LRRC28Q86X40 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC28Q86X40 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC28Q86X40 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC28Q86X40 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.55□□□□□ -1.52
LRRC28Q86X40 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LRRC28Q86X40 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 SMG1P5-202ENST00000529428 4219 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 SMG1P2-201ENST00000566127 4221 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 U3.52-201ENST00000384034 216 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 OR6R1P-201ENST00000431838 940 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC092106.2-201ENST00000436597 487 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC092601.1-201ENST00000444526 383 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 YRDCP3-201ENST00000456507 480 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 RPS7P10-201ENST00000464254 603 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC092349.1-201ENST00000504903 310 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC093870.1-201ENST00000506837 213 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 CYP4F27P-201ENST00000514557 494 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 RNA5SP400-201ENST00000517155 111 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC026956.1-201ENST00000558741 396 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC092718.4-201ENST00000566639 716 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 MIR3189-201ENST00000578735 73 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 WBP1LP11-201ENST00000586141 328 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AP001357.1-201ENST00000586304 1053 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 AC125494.2-201ENST00000602431 657 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 SNORD96A-201ENST00000606577 79 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AL121768.1-201ENST00000613917 2544 ntBASIC5.54□□□□□ -1.52
LRRC28Q86X40 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
LRRC28Q86X40 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LRRC28Q86X40 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC096921.2-201ENST00000561507 1916 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LRRC28Q86X40 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC121334.1-201ENST00000396414 802 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 GPN3P1-201ENST00000423883 535 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC245291.3-201ENST00000443400 292 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC005165.2-201ENST00000466070 380 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC008945.1-201ENST00000505144 499 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC097486.1-201ENST00000515331 210 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC136777.2-201ENST00000522979 358 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC025857.2-201ENST00000602711 238 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 AC027334.1-201ENST00000603257 310 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.53□□□□□ -1.52
LRRC28Q86X40 AL008582.1-201ENST00000609612 442 ntBASIC5.53□□□□□ -1.52
LRRC28Q86X40 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms