Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AL589655.1-201ENST00000405398 482 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 RN7SKP117-201ENST00000410175 264 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 EEF1B2P8-201ENST00000414101 671 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 RPL3P11-201ENST00000434028 1146 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 SUMO2P8-201ENST00000434672 286 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AL606490.8-201ENST00000441624 319 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 GAPDHP33-201ENST00000443168 1013 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AL022319.1-201ENST00000458183 1167 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 RN7SL37P-201ENST00000490461 307 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC139713.1-202ENST00000512366 460 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 SCARNA5-201ENST00000516201 276 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 IGKV1D-32-201ENST00000517449 318 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AP000619.2-201ENST00000546014 969 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 FCGR1CP-201ENST00000579737 1127 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AL008582.1-201ENST00000609612 442 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC095038.1-201ENST00000429248 1591 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 AC123769.1-201ENST00000530992 3192 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AL121768.1-201ENST00000613917 2544 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 RNA5SP382-201ENST00000363355 112 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 RNA5SP478-201ENST00000364657 115 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC245036.1-201ENST00000391727 309 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 YWHAZP5-201ENST00000419975 730 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 BX679664.2-201ENST00000439282 283 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AL022237.1-201ENST00000446663 358 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 UOX-201ENST00000471089 899 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC106800.3-201ENST00000511389 308 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 IGKV1D-22-201ENST00000518953 324 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 RBMS2P1-201ENST00000525031 1226 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 MIR4312-201ENST00000579909 76 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AL353807.4-201ENST00000604995 257 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AL158211.2-201ENST00000607282 395 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC026367.3-201ENST00000619032 590 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC091059.2-201ENST00000623355 614 ntBASIC5.73□□□□□ -1.49
SHFQ7M4L6 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHFQ7M4L6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SHFQ7M4L6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms